Detailed information NTG0974895

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: AABL52_RS20995
• Genome accession: NZ_CP151108
• Coordinates: 4100009..4102609 (-)
• Length: 866 a.a.
• NCBI ID: WP_097845336.1
• Uniprot ID: -
• Organism: Bacillus paramobilis strain IMGN7
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4095009..4107609

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABL52_RS20965 (AABL52_20965)	fabF	4095204..4096442 (-)	1239	WP_000412643.1	beta-ketoacyl-ACP synthase II	-
AABL52_RS20970 (AABL52_20970)	fabH	4096474..4097406 (-)	933	WP_001100534.1	beta-ketoacyl-ACP synthase III	-
AABL52_RS20975 (AABL52_20975)	comZ	4097765..4097941 (-)	177	WP_009879752.1	ComZ family protein	Regulator
AABL52_RS20980 (AABL52_20980)	-	4097995..4098867 (-)	873	WP_144564422.1	NAD(P)-dependent oxidoreductase	-
AABL52_RS20985 (AABL52_20985)	-	4098897..4099631 (-)	735	WP_048545174.1	hydrolase	-
AABL52_RS20990 (AABL52_20990)	-	4099788..4099970 (+)	183	WP_001211113.1	YjzD family protein	-
AABL52_RS20995 (AABL52_20995)	clpC	4100009..4102609 (-)	2601	WP_097845336.1	ATP-dependent chaperone ClpB	Regulator
AABL52_RS21000 (AABL52_21000)	-	4102821..4103000 (-)	180	WP_000531421.1	YjzC family protein	-
AABL52_RS21005 (AABL52_21005)	-	4103493..4104302 (+)	810	WP_001041228.1	Cof-type HAD-IIB family hydrolase	-
AABL52_RS21010 (AABL52_21010)	-	4104407..4104547 (+)	141	WP_000516816.1	hypothetical protein	-
AABL52_RS21015 (AABL52_21015)	-	4104548..4104745 (+)	198	WP_000527404.1	DUF3813 domain-containing protein	-
AABL52_RS21020 (AABL52_21020)	-	4104771..4105628 (-)	858	WP_270342851.1	YitT family protein	-
AABL52_RS21025 (AABL52_21025)	-	4105729..4105860 (+)	132	WP_001120851.1	DUF3941 domain-containing protein	-
AABL52_RS21030 (AABL52_21030)	prsA	4105992..4106849 (+)	858	WP_341518326.1	peptidylprolyl isomerase PrsA	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97419.41 Da
• Isoelectric Point: 5.1961

>NTDB_id=974895 AABL52_RS20995 WP_097845336.1 4100009..4102609(-) (clpC) [Bacillus paramobilis strain IMGN7]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTAHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAESLIKKKPSVTGSGAE
AGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLLAFSEEKGDINQLLTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VELTNAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=974895 AABL52_RS20995 WP_097845336.1 4100009..4102609(-) (clpC) [Bacillus paramobilis strain IMGN7]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCATCA
AGAAGTAGATACTGCTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCAGTGCGTATTTTTCAAAAAATGA
ATGTCGATATAGAAGCGTTAAAACAAGGTGCTGAAAGTTTAATTAAGAAAAAGCCTTCTGTAACGGGAAGTGGTGCAGAA
GCAGGCAAATTATATATAACAGGTGCTCTGCAACAACTACTTGTAAGAGCAGGAAAAGAAGCAGAGAAATTGCAAGATGA
CTACATTTCAGTTGAACATGTATTGCTTGCTTTTTCAGAAGAAAAAGGCGATATAAATCAATTACTTACAAGATTTCATA
TTACGAAAGATAACTTATTACAGTCGTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGACGTGATTTAGTGGCGGAAGTAAGAGCAGGGAAAATTGATCCTGTTATCGGCCGCGA
TAGTGAAATTCGCCGCGTAATTCGCATTCTTTCACGTAAAACGAAAAATAACCCAGTTTTAATTGGTGAGCCAGGTGTTG
GTAAAACAGCAATCGTTGAAGGATTAGCGCAGCGTATTGTGAAAAAGGATGTACCAGAAGGGTTAAAAGATAGAACCATC
TTTGCATTAGATATGAGTGCGCTTGTAGCTGGAGCGAAATTCCGTGGTGAGTTTGAAGAGCGCCTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGCCGCATTTTATTATTCATTGATGAACTTCATACAATCGTCGGCGCTGGTAAAACAGAAG
GTGCGATGGACGCAGGAAATATGTTAAAACCGATGCTTGCGCGTGGTGAACTACATTGTATCGGGGCGACAACATTAGAT
GAATATCGTAAATATATTGAGAAAGATCCAGCGCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA
AGATACAATTTCCATTTTACGTGGTTTAAAAGAGCGCTTTGAAATTTATCACGGTGTAAATATTCATGACCGTGCGATTG
TAGCAGCATCTGTTTTATCAGATCGATATATTTCGGATCGTTTCTTACCAGATAAAGCAATTGATCTTGTTGATGAAGCG
TGTGCAACGATTCGAACAGAGATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGCTGGAAAT
TGAAGAAGCAGCTCTTGGAAAAGAGAAGGACTTTGGTAGCCAAGAACGTCTAAAAACGTTGCAACGTGAATTATCAGATT
TAAAAGAAGTTGCAAGTGGTATGAGAGCGAAATGGGAGAAAGAAAAAGAAGATATTCACAAAGTTCGTGATTTACGTGAA
CATTTAGAGCGTCTGCGCCGTGAATTAGAAGAAGCGGAAGGTAATTACGATTTAAATAAAGCAGCGGAACTTCGCCATGG
GAAAATTCCTGCAATTGAAAAAGAGTTAAAAGAAGCAGAAGAAATGGGCGCACATAATAAACAAGAAAATCGTTTGTTAC
GTGAGGAAGTAAGTGAAGAAGAGATTGCTGATATTGTTTCACGCTGGACTGGTATTCCTGTCGCAAAACTCGTCGAGGGT
GAACGCGAGAAATTACTACGTTTAGAGCAAATTTTATCAGAACGTGTCATCGGACAAGAGGAAGCGGTAAGTTTAGTATC
AGACGCAGTTCTTCGTGCACGCGCTGGTATTAAAGACCCGAACCGTCCAATTGGTTCCTTCATCTTCTTAGGACCGACAG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCACAGTCTTTATTTGATAGTGAAGAGCAAATGATTCGTATCGACATG
TCTGAGTATATGGAGAAACACGCTGTGTCACGCTTAATTGGTGCGCCTCCTGGATATGTAGGATATGAAGAGGGCGGTCA
ATTAACAGAAGCGGTAAGACGTAAACCGTATTCAGTTATTTTGTTAGACGAAATCGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGATGGACGCATTACAGATTCGCAAGGAAGAACAGTAGACTTTAAAAACACGGTTATT
ATTATGACTTCAAATATTGGATCTGCTCATTTATTAGATGGATTAGAAGAAGATGGCTCCATTAAAGAAGAATCAAGAGA
ACTTGTAATGGGGCAATTAAGAGGACATTTCCGACCAGAGTTCTTAAACCGTGTCGATGAAATTATTTTATTCAAACCTC
TTACAACGAATGAAATTAAAGGTATTGTTGATAAAATTGTAAAAGAATTACAAGGTCGTTTAGCTGACCGTCATATTACA
GTTGAATTAACAAATGCAGCAAAAGAATTTGTTGTAGAAGCTGGCTTTGATCCGATGTACGGAGCTCGTCCATTAAAACG
ATATGTACAGCGTCAAGTGGAAACGAAATTAGCGAGAGAATTAATTGCAGGAACAATTACTGACAATAGTCATGTAGTGG
TTGATGTAGAAAATAATGAATTAGTCGTTCATGTAAAGTAA

Domains

Predicted by InterproScan.

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• AAA lid domain (AAA_lid_9) (345-447)

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.543	100	0.48
clpC	Lactococcus lactis subsp. cremoris KW2	47.199	82.448	0.389