Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AABL52_RS20975 Genome accession   NZ_CP151108
Coordinates   4097765..4097941 (-) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus paramobilis strain IMGN7     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4092765..4102941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABL52_RS20955 (AABL52_20955) - 4093418..4094164 (-) 747 WP_000966126.1 YjbA family protein -
  AABL52_RS20960 (AABL52_20960) - 4094309..4095097 (-) 789 WP_097845337.1 DUF2268 domain-containing putative Zn-dependent protease -
  AABL52_RS20965 (AABL52_20965) fabF 4095204..4096442 (-) 1239 WP_000412643.1 beta-ketoacyl-ACP synthase II -
  AABL52_RS20970 (AABL52_20970) fabH 4096474..4097406 (-) 933 WP_001100534.1 beta-ketoacyl-ACP synthase III -
  AABL52_RS20975 (AABL52_20975) comZ 4097765..4097941 (-) 177 WP_009879752.1 ComZ family protein Regulator
  AABL52_RS20980 (AABL52_20980) - 4097995..4098867 (-) 873 WP_144564422.1 NAD(P)-dependent oxidoreductase -
  AABL52_RS20985 (AABL52_20985) - 4098897..4099631 (-) 735 WP_048545174.1 hydrolase -
  AABL52_RS20990 (AABL52_20990) - 4099788..4099970 (+) 183 WP_001211113.1 YjzD family protein -
  AABL52_RS20995 (AABL52_20995) clpC 4100009..4102609 (-) 2601 WP_097845336.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=974894 AABL52_RS20975 WP_009879752.1 4097765..4097941(-) (comZ) [Bacillus paramobilis strain IMGN7]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=974894 AABL52_RS20975 WP_009879752.1 4097765..4097941(-) (comZ) [Bacillus paramobilis strain IMGN7]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCTCTTGATATGGAGAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment