Detailed information NTG0974891

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACMX8W_RS14430
• Genome accession: NZ_CP180439
• Coordinates: 2731476..2732603 (-)
• Length: 375 a.a.
• NCBI ID: WP_014477416.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain Z-294
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2726476..2737603

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMX8W_RS14405 (ACMX8W_14405)	-	2726670..2727188 (-)	519	WP_047182913.1	GNAT family N-acetyltransferase	-
ACMX8W_RS14410 (ACMX8W_14410)	-	2727207..2727662 (-)	456	WP_047182914.1	MarR family winged helix-turn-helix transcriptional regulator	-
ACMX8W_RS14415 (ACMX8W_14415)	-	2727778..2728425 (+)	648	WP_415749586.1	YczE/YyaS/YitT family protein	-
ACMX8W_RS14420 (ACMX8W_14420)	-	2728531..2729331 (-)	801	WP_047182916.1	dihydrodipicolinate synthase family protein	-
ACMX8W_RS14425 (ACMX8W_14425)	-	2729480..2730859 (+)	1380	WP_047182917.1	PLP-dependent aminotransferase family protein	-
ACMX8W_RS14430 (ACMX8W_14430)	rapC	2731476..2732603 (-)	1128	WP_014477416.1	Rap family tetratricopeptide repeat protein	Regulator
ACMX8W_RS14435 (ACMX8W_14435)	-	2732789..2732935 (+)	147	Protein_2798	hypothetical protein	-
ACMX8W_RS14440 (ACMX8W_14440)	-	2733190..2733526 (+)	337	Protein_2799	tRNA-Val4	-
ACMX8W_RS14445 (ACMX8W_14445)	-	2733587..2734021 (+)	435	WP_047182918.1	SMI1/KNR4 family protein	-
ACMX8W_RS14450 (ACMX8W_14450)	-	2734267..2734989 (-)	723	WP_015384163.1	NPP1 family protein	-
ACMX8W_RS14455 (ACMX8W_14455)	bltR	2735575..2736396 (-)	822	WP_047182919.1	multidrug efflux transcriptional regulator BltR	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44164.33 Da
• Isoelectric Point: 5.6714

>NTDB_id=974891 ACMX8W_RS14430 WP_014477416.1 2731476..2732603(-) (rapC) [Bacillus subtilis strain Z-294]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALELSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLKALYVDAVDQQGVNQTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=974891 ACMX8W_RS14430 WP_014477416.1 2731476..2732603(-) (rapC) [Bacillus subtilis strain Z-294]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCCTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACAACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTATTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCAGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCATTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAGAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAAAGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATCAAACAATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (195-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.415	100	0.445
rapF	Bacillus subtilis subsp. subtilis str. 168	39.683	100	0.4