Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   AABL52_RS06590 Genome accession   NZ_CP151108
Coordinates   1250928..1251722 (+) Length   264 a.a.
NCBI ID   WP_141524208.1    Uniprot ID   -
Organism   Bacillus paramobilis strain IMGN7     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1245928..1256722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABL52_RS06575 (AABL52_06575) argR 1246767..1247216 (+) 450 WP_001032581.1 arginine repressor ArgR -
  AABL52_RS06580 (AABL52_06580) recN 1247484..1249223 (+) 1740 WP_000947744.1 DNA repair protein RecN Machinery gene
  AABL52_RS06585 (AABL52_06585) spoIVB 1249342..1250640 (+) 1299 WP_341519073.1 SpoIVB peptidase -
  AABL52_RS06590 (AABL52_06590) spo0A 1250928..1251722 (+) 795 WP_141524208.1 sporulation transcription factor Spo0A Regulator
  AABL52_RS06595 (AABL52_06595) - 1252015..1253541 (+) 1527 WP_097843921.1 glycosyltransferase family 39 protein -
  AABL52_RS06600 (AABL52_06600) - 1253728..1253874 (-) 147 WP_120450858.1 YycC family protein -
  AABL52_RS06605 (AABL52_06605) - 1253925..1254653 (+) 729 WP_000172592.1 glycerophosphodiester phosphodiesterase -
  AABL52_RS06610 (AABL52_06610) - 1254701..1254934 (-) 234 WP_001190187.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.16 Da        Isoelectric Point: 7.1177

>NTDB_id=974877 AABL52_RS06590 WP_141524208.1 1250928..1251722(+) (spo0A) [Bacillus paramobilis strain IMGN7]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLNEKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=974877 AABL52_RS06590 WP_141524208.1 1250928..1251722(+) (spo0A) [Bacillus paramobilis strain IMGN7]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAATGAAAAGCAGCCGGATGTACTTG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGCTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTGAGCGGTAAGGCGAACGCTACCATTAAACGTCCAC
TTCCATCTTTCCGCTCAGCAACGACAATAGATGGGAAGCCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTACCTGCTCATATTAAAGGGTATATGTATTTAAGGGAAGCAATCTCTATGGTGTACAATGATATCGAATTACT
GGGATCTATTACGAAAGTATTATATCCAGATATCGCGAAAAAATATAATACAACAGCAAGCCGCGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCGTGGAGTCGTGGGAATATTGATTCTATTTCGTCTTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCAACAAATTCCGAGTTCATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment