Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   ACMX8W_RS09690 Genome accession   NZ_CP180439
Coordinates   1914863..1915480 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain Z-294     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1909863..1920480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMX8W_RS09660 (ACMX8W_09660) yndJ 1910185..1911825 (+) 1641 WP_015383759.1 YndJ family protein -
  ACMX8W_RS09665 (ACMX8W_09665) - 1911912..1912226 (+) 315 WP_174616646.1 hypothetical protein -
  ACMX8W_RS09670 (ACMX8W_09670) pghL 1912451..1913209 (+) 759 WP_047182675.1 gamma-polyglutamate hydrolase PghL -
  ACMX8W_RS09675 (ACMX8W_09675) - 1913236..1913685 (-) 450 WP_015483284.1 YndM family protein -
  ACMX8W_RS09680 (ACMX8W_09680) fosB 1913891..1914325 (+) 435 WP_015383763.1 metallothiol transferase FosB -
  ACMX8W_RS09685 (ACMX8W_09685) - 1914234..1914491 (+) 258 WP_415749603.1 hypothetical protein -
  ACMX8W_RS09690 (ACMX8W_09690) dinR/lexA 1914863..1915480 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  ACMX8W_RS09695 (ACMX8W_09695) yneA 1915630..1915947 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  ACMX8W_RS09700 (ACMX8W_09700) dinL 1915966..1916619 (+) 654 WP_015383764.1 recombinase family protein -
  ACMX8W_RS09705 (ACMX8W_09705) ynzC 1916683..1916916 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  ACMX8W_RS09710 (ACMX8W_09710) recP/tkt 1917085..1919088 (+) 2004 WP_014476936.1 transketolase Machinery gene
  ACMX8W_RS09715 (ACMX8W_09715) sirA 1919241..1919687 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ACMX8W_RS09720 (ACMX8W_09720) yneF 1919773..1919991 (+) 219 WP_003221221.1 YneF family protein -
  ACMX8W_RS09725 (ACMX8W_09725) ynzD 1920065..1920238 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=974863 ACMX8W_RS09690 WP_003238209.1 1914863..1915480(-) (dinR/lexA) [Bacillus subtilis strain Z-294]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=974863 ACMX8W_RS09690 WP_003238209.1 1914863..1915480(-) (dinR/lexA) [Bacillus subtilis strain Z-294]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTTAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GACTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCCGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1