Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   ACMX8W_RS09710 Genome accession   NZ_CP180439
Coordinates   1917085..1919088 (+) Length   667 a.a.
NCBI ID   WP_014476936.1    Uniprot ID   -
Organism   Bacillus subtilis strain Z-294     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1912085..1924088
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMX8W_RS09670 (ACMX8W_09670) pghL 1912451..1913209 (+) 759 WP_047182675.1 gamma-polyglutamate hydrolase PghL -
  ACMX8W_RS09675 (ACMX8W_09675) - 1913236..1913685 (-) 450 WP_015483284.1 YndM family protein -
  ACMX8W_RS09680 (ACMX8W_09680) fosB 1913891..1914325 (+) 435 WP_015383763.1 metallothiol transferase FosB -
  ACMX8W_RS09685 (ACMX8W_09685) - 1914234..1914491 (+) 258 WP_415749603.1 hypothetical protein -
  ACMX8W_RS09690 (ACMX8W_09690) dinR/lexA 1914863..1915480 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  ACMX8W_RS09695 (ACMX8W_09695) yneA 1915630..1915947 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  ACMX8W_RS09700 (ACMX8W_09700) dinL 1915966..1916619 (+) 654 WP_015383764.1 recombinase family protein -
  ACMX8W_RS09705 (ACMX8W_09705) ynzC 1916683..1916916 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  ACMX8W_RS09710 (ACMX8W_09710) recP/tkt 1917085..1919088 (+) 2004 WP_014476936.1 transketolase Machinery gene
  ACMX8W_RS09715 (ACMX8W_09715) sirA 1919241..1919687 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ACMX8W_RS09720 (ACMX8W_09720) yneF 1919773..1919991 (+) 219 WP_003221221.1 YneF family protein -
  ACMX8W_RS09725 (ACMX8W_09725) ynzD 1920065..1920238 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  ACMX8W_RS09730 (ACMX8W_09730) ccdA 1920458..1921165 (+) 708 WP_015383767.1 cytochrome c-type biogenesis protein CcdA -
  ACMX8W_RS09735 (ACMX8W_09735) yneI 1921254..1921616 (+) 363 WP_003245707.1 response regulator -
  ACMX8W_RS09740 (ACMX8W_09740) yneJ 1921695..1922186 (+) 492 WP_072174017.1 CcdC family protein -
  ACMX8W_RS09745 (ACMX8W_09745) yneK 1922217..1922645 (-) 429 WP_047182676.1 DynA interaction protein YneK -
  ACMX8W_RS09750 (ACMX8W_09750) cotM 1922879..1923271 (-) 393 WP_015251997.1 outer spore coat protein CotM -
  ACMX8W_RS09755 (ACMX8W_09755) sspP 1923352..1923498 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  ACMX8W_RS09760 (ACMX8W_09760) sspO 1923530..1923676 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72300.39 Da        Isoelectric Point: 4.7291

>NTDB_id=974864 ACMX8W_RS09710 WP_014476936.1 1917085..1919088(+) (recP/tkt) [Bacillus subtilis strain Z-294]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTAEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=974864 ACMX8W_RS09710 WP_014476936.1 1917085..1919088(+) (recP/tkt) [Bacillus subtilis strain Z-294]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGACA
TCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCTGGACACCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATCGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTATGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGTAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTAGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCAATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACAGCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCCTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTAAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACAGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCAGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCAAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562


Multiple sequence alignment