Detailed information NTG0974864

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: AABL52_RS01615
• Genome accession: NZ_CP151108
• Coordinates: 344954..346303 (+)
• Length: 449 a.a.
• NCBI ID: WP_341518804.1
• Uniprot ID: -
• Organism: Bacillus paramobilis strain IMGN7
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 339954..351303

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABL52_RS01595 (AABL52_01595)	-	341059..341694 (-)	636	WP_000926679.1	YigZ family protein	-
AABL52_RS01600 (AABL52_01600)	-	341934..342776 (+)	843	WP_000844775.1	DegV family protein	-
AABL52_RS01605 (AABL52_01605)	-	342948..343262 (+)	315	WP_000400858.1	helix-turn-helix domain-containing protein	-
AABL52_RS01610 (AABL52_01610)	-	343516..344826 (+)	1311	WP_144563952.1	C40 family peptidase	-
AABL52_RS01615 (AABL52_01615)	comFA	344954..346303 (+)	1350	WP_341518804.1	ATP-dependent helicase ComFA	Machinery gene
AABL52_RS01620 (AABL52_01620)	-	346303..347007 (+)	705	WP_081256977.1	ComF family protein	-
AABL52_RS01625 (AABL52_01625)	cspC	347134..347331 (+)	198	WP_001990088.1	cold shock protein CspC	-
AABL52_RS01630 (AABL52_01630)	raiA	347652..348194 (+)	543	WP_000671193.1	ribosome-associated translation inhibitor RaiA	-
AABL52_RS01635 (AABL52_01635)	secA	348469..350976 (+)	2508	WP_097844752.1	preprotein translocase subunit SecA	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 50970.63 Da
• Isoelectric Point: 9.6154

>NTDB_id=974864 AABL52_RS01615 WP_341518804.1 344954..346303(+) (comFA) [Bacillus paramobilis strain IMGN7]
MLAGKQLLLEELSSNLRRELSDLKRKGEVVCVQGITKKASKYICQRCGNIEQRLFASFLCNRCSEVCTYCRKCITMGRVS
ECAVLVRGIAERKGEKGLNSLQWNGALSTGQELAAQGVIEAIKKKDSFFIWAVCGAGKTEMLFYGIAEALQKGERVCIAT
PRTDVVLELAPRLQEVFPHINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGVIISGRYHRYPLPVPLFCWCGNWKKSLHHKKIPRVLLQWLEMYVNKKHPIFL
FVPHVRYIEELSLILKTLDPRIDGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHCGKTEAMVRAKRHIQSMNKKAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=974864 AABL52_RS01615 WP_341518804.1 344954..346303(+) (comFA) [Bacillus paramobilis strain IMGN7]
ATGCTTGCTGGAAAACAGTTGCTATTAGAAGAACTTTCTTCAAATTTACGGAGAGAATTAAGTGATTTGAAAAGGAAGGG
AGAGGTCGTATGTGTACAAGGTATAACAAAAAAGGCTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAACGGC
TATTTGCATCATTTTTATGTAATAGGTGCAGTGAAGTGTGCACGTATTGTCGGAAGTGTATAACGATGGGGAGGGTAAGT
GAATGTGCTGTACTCGTTCGTGGAATCGCTGAAAGAAAAGGAGAAAAAGGTTTAAATTCGTTACAGTGGAACGGGGCCTT
GTCTACTGGTCAGGAGTTGGCGGCGCAAGGTGTTATAGAAGCTATTAAGAAGAAAGACTCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACTGAAATGCTATTTTACGGTATTGCAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACA
CCAAGAACAGATGTTGTACTGGAATTAGCACCGAGATTACAAGAAGTGTTTCCGCATATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGACCGGGAAAAAGATGCAGCGTTAGTCGTTGCAACGACGCATCAATTGTTACGTTACTATAGAGCATTTC
ATGTCATGATTGTAGATGAGATAGATGCTTTTCCGTATCATGCGGATCAAATGTTACAGTATGCAGTACAACAAGCGATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACTCCAGATGAAAAGTGGAAGCGTAATTTCAGAAGGGGTAAACAAAA
AGGTGTCATTATCTCTGGGCGATATCATCGTTATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATCCCTCGAGTTTTACTACAATGGTTAGAAATGTACGTAAACAAAAAACATCCCATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAATTGAGCCTGATATTGAAAACGCTGGATCCTAGAATCGATGGTGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTAGCAGCTTTCAGAAAGGGAGAAATTCCGTTATTAGTTACGACGACAATTTTAG
AGAGAGGAGTAACTGTGAAGAATTTACAAGTTGCGGTGTTAGGGGCAGAAGAAGAAATCTTTTCGGAAAGTGCACTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCTTATGGCGAGGTTGTTTATTTTCATTGCGGTAAGACAGAGGC
GATGGTACGCGCGAAAAGGCATATTCAAAGTATGAACAAAAAGGCGAAAGAACAAGGATTAATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (108-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.679	98.441	0.499
comFA	Latilactobacillus sakei subsp. sakei 23K	39.189	98.886	0.388