Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   ACMX77_RS17325 Genome accession   NZ_CP180438
Coordinates   3274046..3274906 (-) Length   286 a.a.
NCBI ID   WP_015483633.1    Uniprot ID   -
Organism   Bacillus subtilis strain W-2     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3269046..3279906
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMX77_RS17290 (ACMX77_17290) mrpE 3269277..3269753 (+) 477 WP_174616587.1 Na+/H+ antiporter subunit E -
  ACMX77_RS17295 (ACMX77_17295) mrpF 3269753..3270037 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ACMX77_RS17300 (ACMX77_17300) mnhG 3270021..3270395 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  ACMX77_RS17305 (ACMX77_17305) yuxO 3270434..3270814 (-) 381 WP_174616601.1 hotdog fold thioesterase -
  ACMX77_RS17310 (ACMX77_17310) comA 3270832..3271476 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ACMX77_RS17315 (ACMX77_17315) comP 3271557..3273857 (-) 2301 WP_415749590.1 histidine kinase Regulator
  ACMX77_RS17320 (ACMX77_17320) comX 3273869..3274033 (-) 165 WP_015384519.1 competence pheromone ComX -
  ACMX77_RS17325 (ACMX77_17325) comQ 3274046..3274906 (-) 861 WP_015483633.1 polyprenyl synthetase family protein Regulator
  ACMX77_RS17330 (ACMX77_17330) degQ 3275091..3275231 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ACMX77_RS17335 (ACMX77_17335) - 3275453..3275578 (+) 126 WP_154796978.1 hypothetical protein -
  ACMX77_RS17340 (ACMX77_17340) - 3275692..3276060 (+) 369 WP_015483634.1 hypothetical protein -
  ACMX77_RS17345 (ACMX77_17345) pdeH 3276036..3277265 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  ACMX77_RS17350 (ACMX77_17350) pncB 3277402..3278874 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  ACMX77_RS17355 (ACMX77_17355) pncA 3278890..3279441 (-) 552 WP_014477836.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 286 a.a.        Molecular weight: 32511.47 Da        Isoelectric Point: 4.7414

>NTDB_id=974761 ACMX77_RS17325 WP_015483633.1 3274046..3274906(-) (comQ) [Bacillus subtilis strain W-2]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIELLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFTQEILNFALQSIQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIIAQIENDYQGLYYLNNDFIQKKNTLAYLYLNKRFNAASAEILSWYENAELFLSLNPKQIK
EKLTEAGVVQYLLVMKHLSLQKLKKEIARLELQENKIKKLITGIIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=974761 ACMX77_RS17325 WP_015483633.1 3274046..3274906(-) (comQ) [Bacillus subtilis strain W-2]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATTGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTACACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGCGC
CGCAAACTGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCCTGTGTAATGGGAGTA
ATGTTGGCAACAGGCAAATACCATCCCATTGTAGCTTCTTATTCTTATGAACTTGGGATTATTGCACAAATCGAAAATGA
TTACCAAGGTTTATATTATTTAAATAACGATTTTATTCAGAAGAAAAACACATTGGCATACTTATACTTAAATAAACGTT
TTAATGCAGCTTCTGCAGAAATCTTGAGTTGGTATGAAAATGCTGAGTTGTTCTTATCATTGAATCCCAAACAAATAAAA
GAAAAATTAACTGAGGCAGGCGTAGTGCAATATTTACTTGTAATGAAACACTTGTCATTACAAAAACTAAAGAAAGAAAT
TGCTAGATTAGAATTGCAAGAGAATAAAATAAAAAAATTAATAACAGGAATCATAAAATAA

Domains


Predicted by InterProScan.

(39-194)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.423

99.301

0.451