Detailed information NTG0973786

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: AABM54_RS22165
• Genome accession: NZ_CP150918
• Coordinates: 4939534..4941123 (+)
• Length: 529 a.a.
• NCBI ID: WP_347902087.1
• Uniprot ID: -
• Organism: Pseudomonas purpurea strain DGS26
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 4934534..4946123

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABM54_RS22145	pgeF	4936327..4937052 (-)	726	WP_347902083.1	peptidoglycan editing factor PgeF	-
AABM54_RS22150	rluD	4937049..4938011 (-)	963	WP_347902084.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
AABM54_RS22155	-	4938163..4939185 (+)	1023	WP_347902085.1	outer membrane protein assembly factor BamD	-
AABM54_RS22160	-	4939311..4939544 (+)	234	WP_347902086.1	PP0621 family protein	-
AABM54_RS22165	pilS	4939534..4941123 (+)	1590	WP_347902087.1	ATP-binding protein	Regulator
AABM54_RS22170	pilR	4941120..4942466 (+)	1347	WP_347902088.1	sigma-54 dependent transcriptional regulator	Regulator
AABM54_RS22175	thiO	4942619..4943719 (-)	1101	WP_347902089.1	glycine oxidase ThiO	-
AABM54_RS22180	-	4943777..4944178 (-)	402	WP_347902090.1	type IV pilin protein	-

Sequence

Protein

• Length: 529 a.a.
• Molecular weight: 58497.36 Da
• Isoelectric Point: 7.1583

>NTDB_id=973786 AABM54_RS22165 WP_347902087.1 4939534..4941123(+) (pilS) [Pseudomonas purpurea strain DGS26]
MIAEAISPDGKQAQRLLRLYHLYRLSIGIVLVLLISSNLDNQLLEFANDELLRNTSWLYLVLNILLVVFLENPHRHGQIF
SLALVDVLLLSTLFYAAGGAASAVGNLLIVSVAISNTLLRGRIGLLIAAVAAIGIVFLSFYLSLNHPTGASSYLQAGTLG
ALCFAAALLVQGLTRRLELSETLAEQRASEVIGLEALNALILQRMRTGILVLDDQRRVQLANQSALSLLGVHDLTGQLID
THAPPLVERLQLWFNNPTLRPQSLKVASNGLELQPSFIALGQTPQHQTLVFLEDQAQVAQQAQQLKLAALGRLTAGIAHE
IRNPLGAISHAAQLLRESEELTGADRRLTQIIQDHSQRMNRVIENVLQLSRRQPTEPQRLDLKAWLQDFVHKVRASGPQQ
QPVHVRIAEGHFITLMDPDQLTQILDNLVRNAWRHSAMLHSQAQVWLSLFIDPHSQLPTLEVQDDGPGVAPDQHTHLFEP
FFTTSNQGTGLGLYLSRELCESNQARLDFIPRQGGGCFRITFAHGRKQS

Nucleotide

• Length: 1590 bp

>NTDB_id=973786 AABM54_RS22165 WP_347902087.1 4939534..4941123(+) (pilS) [Pseudomonas purpurea strain DGS26]
GTGATCGCTGAGGCGATCAGTCCCGACGGCAAACAGGCGCAGCGTCTGCTGCGCCTCTATCATCTCTACCGCTTGAGCAT
CGGCATCGTTCTGGTGCTGCTGATCTCCAGCAACCTGGACAACCAGTTGCTGGAGTTCGCCAATGACGAACTGCTGCGCA
ACACCAGTTGGCTCTACCTGGTGCTGAACATCCTGCTGGTGGTGTTTCTTGAAAATCCCCACCGCCACGGGCAAATCTTC
AGCCTGGCCCTGGTCGACGTGCTGCTGCTTTCAACGTTGTTCTACGCCGCTGGCGGAGCTGCCAGCGCCGTCGGCAATCT
GTTGATTGTCTCCGTTGCCATCAGCAATACCCTGCTGCGCGGACGCATCGGCCTGTTGATTGCGGCGGTGGCGGCTATCG
GCATCGTGTTCTTGAGCTTTTACCTGAGCCTCAACCACCCGACAGGCGCCAGCAGTTACTTGCAGGCCGGCACCCTCGGA
GCCCTGTGCTTCGCCGCCGCGTTGCTGGTGCAAGGATTGACCCGGCGCCTGGAACTCAGCGAAACCCTGGCCGAACAGCG
GGCCAGCGAAGTAATTGGCCTGGAAGCCCTCAATGCCCTGATTTTGCAACGCATGCGCACGGGCATTCTGGTGCTGGATG
ACCAGCGTCGGGTGCAACTGGCCAATCAGAGCGCCCTGAGCCTGCTGGGCGTGCATGACCTGACCGGCCAGTTGATCGAC
ACCCACGCACCGCCGCTGGTCGAGCGCCTGCAACTGTGGTTCAACAACCCGACCTTGCGCCCCCAAAGCCTGAAAGTCGC
CAGCAATGGCCTGGAGCTGCAACCGAGCTTTATCGCGCTGGGCCAGACCCCGCAGCATCAGACCCTGGTGTTCCTCGAAG
ATCAGGCCCAAGTGGCGCAACAGGCCCAGCAACTCAAACTGGCCGCATTAGGACGGCTGACGGCCGGTATCGCCCACGAA
ATCCGCAACCCACTGGGCGCGATCAGCCATGCGGCGCAGTTGCTGCGTGAATCTGAGGAACTGACCGGCGCGGACCGGCG
TCTGACGCAGATTATCCAAGACCACTCCCAGCGCATGAATCGAGTCATCGAAAACGTCCTGCAACTCTCCAGACGCCAAC
CCACCGAACCGCAACGGCTCGACCTCAAGGCCTGGTTGCAGGACTTCGTCCACAAAGTACGGGCCAGCGGACCGCAACAG
CAACCTGTCCACGTACGGATCGCCGAGGGCCACTTCATCACCCTGATGGACCCGGACCAACTGACCCAGATTCTCGACAA
CCTGGTGCGCAACGCCTGGCGTCACAGCGCCATGCTGCACTCGCAGGCGCAGGTCTGGCTCTCGCTGTTCATCGACCCGC
ACAGCCAGTTGCCGACCCTGGAGGTTCAAGATGACGGCCCCGGCGTGGCGCCGGACCAGCACACGCATCTGTTCGAACCC
TTCTTCACCACCAGCAACCAGGGCACTGGCCTGGGTCTCTATCTGTCCCGTGAGCTGTGCGAAAGCAACCAGGCCCGCCT
AGACTTCATTCCACGCCAAGGCGGCGGCTGCTTTCGCATCACCTTTGCTCACGGACGGAAACAAAGTTGA

Domains

Predicted by InterproScan.

• PAS domain (PAS_8) (202-247)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (417-521)

• His Kinase A (phospho-acceptor) domain (HisKA) (309-373)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	60.377	100	0.605