Detailed information NTG0973746

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: AABM55_RS03660
• Genome accession: NZ_CP150917
• Coordinates: 837797..839386 (-)
• Length: 529 a.a.
• NCBI ID: WP_347928853.1
• Uniprot ID: -
• Organism: Pseudomonas helvetica strain DGS28
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 832797..844386

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABM55_RS03645	-	834842..835243 (+)	402	WP_054595524.1	type IV pilin protein	-
AABM55_RS03650	thiO	835301..836401 (+)	1101	WP_347928851.1	glycine oxidase ThiO	-
AABM55_RS03655	pilR	836454..837800 (-)	1347	WP_347928852.1	sigma-54 dependent transcriptional regulator	Regulator
AABM55_RS03660	pilS	837797..839386 (-)	1590	WP_347928853.1	ATP-binding protein	Regulator
AABM55_RS03665	-	839376..839609 (-)	234	WP_054595528.1	PP0621 family protein	-
AABM55_RS03670	-	839734..840750 (-)	1017	WP_054595529.1	outer membrane protein assembly factor BamD	-
AABM55_RS03675	rluD	840903..841865 (+)	963	WP_054595530.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
AABM55_RS03680	pgeF	841862..842587 (+)	726	WP_347928854.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 529 a.a.
• Molecular weight: 58294.06 Da
• Isoelectric Point: 6.8230

>NTDB_id=973746 AABM55_RS03660 WP_347928853.1 837797..839386(-) (pilS) [Pseudomonas helvetica strain DGS28]
MIAEISSPGDKQAQRLLRLYHLYRLSIGLLLVLLISSNMDNQLLEFTNDDLLRNGSWLYLILNILLVVFAGNPRQPAQIF
GLTLVDILLLSALFYAAGGVPSAIGNLLIVSVAIGNTLLRRRIGLLLAAVAAIGIISLTFSLSGSHPTGANHYLQAGTLG
ALCFAAALLVQGLTRQLEVSESLAQQRASEVVSLEALNALILQRMRTGILVLDSERRVQLANHSALSLFGQTHLDGQLID
DYSTALVERLQLWLNNPTLRPQSLKVARTGLELQPSFIALGLNEQRQTLVFLEDLAQVAQQAQQLKLAALGRLTAGIAHE
IRNPLGAISHAAQLLNESEELIGADRRLTQIIQDHSQRMNRVIENVLQLSRRQQVVPQRLDLKQWLEQFVCTVREGATDR
QQIHLNAGPGPFTTLIDPDQLTQVLDNLLRNAWRHSALAHEQAEVWLTLFIDPDSQLPTLDVLDNGPGVSAEQQAHLFEP
FFTTSSQGTGLGLYLSRELCESNQARLDFKPRQGGACFRITFAHGRKQS

Nucleotide

• Length: 1590 bp

>NTDB_id=973746 AABM55_RS03660 WP_347928853.1 837797..839386(-) (pilS) [Pseudomonas helvetica strain DGS28]
GTGATCGCTGAGATCTCGAGCCCTGGCGACAAACAGGCCCAGCGACTGCTGCGCCTCTATCATCTCTACCGTTTAAGCAT
CGGCCTCCTACTGGTGCTGTTGATCTCCAGCAACATGGACAACCAGTTGCTGGAGTTCACCAACGACGACCTGCTGCGCA
ATGGCAGTTGGTTGTACCTGATTCTGAATATCCTGCTGGTGGTATTTGCGGGAAACCCCAGACAACCCGCACAGATCTTC
GGCCTCACGCTGGTTGATATCCTGCTGTTATCAGCGCTGTTCTATGCCGCAGGTGGCGTCCCCAGCGCCATCGGCAATCT
GCTGATCGTGTCCGTGGCGATCGGCAATACACTGCTGCGCCGGCGCATCGGCCTGCTGCTCGCGGCAGTCGCCGCCATCG
GTATCATTTCCCTGACTTTCTCCCTGAGCGGCAGCCACCCGACTGGCGCCAATCACTACTTGCAAGCCGGCACCCTGGGC
GCCCTGTGCTTTGCCGCAGCCTTGCTGGTGCAAGGCCTGACCCGACAACTGGAGGTCAGCGAGAGTCTGGCCCAGCAGCG
CGCCAGCGAAGTGGTCAGCCTGGAAGCGCTCAATGCGCTGATCCTGCAACGCATGCGCACCGGCATCCTGGTACTCGACA
GTGAGCGCCGGGTTCAGTTGGCCAATCACAGCGCCTTGAGTCTGTTTGGCCAGACACACCTCGACGGCCAACTCATCGAC
GATTATTCGACAGCCTTGGTCGAGCGCCTGCAACTCTGGCTCAACAACCCGACCTTGCGCCCACAAAGCCTGAAAGTCGC
CCGCACTGGCCTGGAACTGCAACCGAGCTTCATCGCGCTGGGCCTGAACGAACAACGCCAGACCCTGGTATTTCTCGAAG
ACCTTGCCCAGGTCGCGCAACAAGCCCAGCAACTCAAGCTTGCAGCATTGGGGCGGCTGACCGCAGGCATTGCCCATGAA
ATTCGCAACCCATTGGGTGCCATCAGCCACGCGGCGCAGTTGCTGAACGAGTCTGAGGAACTGATCGGCGCCGACCGGCG
TCTGACGCAGATTATTCAGGACCATTCTCAACGCATGAACCGAGTGATAGAAAACGTCCTGCAGCTTTCACGGCGCCAGC
AAGTCGTACCGCAACGGCTCGACTTGAAGCAGTGGCTGGAGCAGTTCGTGTGCACGGTGCGCGAAGGAGCAACGGATCGC
CAACAGATTCATCTGAACGCCGGTCCAGGCCCCTTCACCACCTTGATAGACCCAGACCAACTGACTCAGGTGCTCGATAA
CCTGTTGCGCAATGCCTGGCGCCACAGCGCCCTTGCGCATGAACAGGCCGAAGTCTGGCTCACGCTGTTTATCGACCCCG
ACAGTCAGCTTCCAACCCTGGATGTGCTGGACAATGGCCCCGGCGTTTCAGCGGAGCAGCAAGCGCATTTGTTCGAACCG
TTCTTCACCACCAGTAGCCAGGGTACTGGCCTGGGTCTCTATCTGTCCCGTGAGCTGTGCGAAAGCAACCAGGCCCGCCT
AGACTTCAAACCACGCCAAGGCGGCGCCTGCTTTCGCATCACCTTTGCTCACGGACGGAAACAAAGTTGA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (309-373)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (417-522)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	59.057	100	0.592