Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AABM56_RS19540 Genome accession   NZ_CP150916
Coordinates   4219299..4219706 (-) Length   135 a.a.
NCBI ID   WP_007161679.1    Uniprot ID   A0AAX3KW86
Organism   Pseudomonas aestiva strain DGS32     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4214299..4224706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABM56_RS19520 - 4215205..4216053 (-) 849 WP_133861444.1 CheR family methyltransferase -
  AABM56_RS19525 - 4216115..4218145 (-) 2031 WP_133861445.1 methyl-accepting chemotaxis protein -
  AABM56_RS19530 - 4218307..4218843 (-) 537 WP_133861446.1 chemotaxis protein CheW -
  AABM56_RS19535 pilH 4218893..4219258 (-) 366 WP_007161680.1 twitching motility response regulator PilH -
  AABM56_RS19540 pilG 4219299..4219706 (-) 408 WP_007161679.1 twitching motility response regulator PilG Regulator
  AABM56_RS19545 gshB 4219927..4220877 (+) 951 WP_133861447.1 glutathione synthase -
  AABM56_RS19550 - 4220981..4221859 (+) 879 WP_133861448.1 TonB family protein -
  AABM56_RS19555 - 4221915..4222484 (+) 570 WP_133861449.1 YqgE/AlgH family protein -
  AABM56_RS19560 ruvX 4222481..4222933 (+) 453 WP_133861450.1 Holliday junction resolvase RuvX -
  AABM56_RS19565 pyrR 4222936..4223445 (+) 510 WP_133861451.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AABM56_RS19570 - 4223461..4224459 (+) 999 WP_133861452.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14917.33 Da        Isoelectric Point: 7.2433

>NTDB_id=973732 AABM56_RS19540 WP_007161679.1 4219299..4219706(-) (pilG) [Pseudomonas aestiva strain DGS32]
MEQYSEGLKVMVIDDSKTIRRTAETLLKKVGCEVITAIDGFDALAKIADSHPHIIFVDIMMPRLDGYQTCALIKNNSAFR
ATPVIMLSSRDGLFDKAKGRIVGSDQYLTKPFSKEELIGAIKTHVPSFTPLEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=973732 AABM56_RS19540 WP_007161679.1 4219299..4219706(-) (pilG) [Pseudomonas aestiva strain DGS32]
ATGGAACAGTATTCGGAAGGGCTGAAGGTCATGGTGATCGACGACTCGAAGACGATTCGTCGGACCGCCGAGACCCTGCT
CAAGAAAGTTGGCTGCGAAGTCATCACTGCCATCGATGGATTCGATGCGCTCGCCAAGATCGCCGATAGTCATCCCCACA
TCATCTTCGTGGACATCATGATGCCGCGACTGGATGGCTATCAGACCTGCGCGCTGATCAAGAACAACAGCGCCTTCCGC
GCGACGCCCGTCATCATGCTCTCTTCCCGTGACGGACTCTTCGACAAGGCCAAGGGCCGCATCGTCGGCTCTGACCAGTA
CCTCACCAAACCCTTCAGCAAAGAAGAGCTGATCGGTGCGATCAAGACCCACGTCCCCAGTTTCACTCCGCTCGAACAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.016

94.074

0.696
  vicR Streptococcus mutans UA159

39.683

93.333

0.37

Multiple sequence alignment