Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   WOB24_RS16295 Genome accession   NZ_CP150891
Coordinates   3495089..3495496 (-) Length   135 a.a.
NCBI ID   WP_339080343.1    Uniprot ID   -
Organism   Pseudomonas sp. TMP25     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3490089..3500496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WOB24_RS16275 (WOB24_16275) - 3491037..3491894 (-) 858 WP_341305450.1 CheR family methyltransferase -
  WOB24_RS16280 (WOB24_16280) - 3491964..3494009 (-) 2046 WP_341303948.1 methyl-accepting chemotaxis protein -
  WOB24_RS16285 (WOB24_16285) - 3494094..3494630 (-) 537 WP_341303949.1 chemotaxis protein CheW -
  WOB24_RS16290 (WOB24_16290) pilH 3494676..3495041 (-) 366 WP_296131446.1 twitching motility response regulator PilH -
  WOB24_RS16295 (WOB24_16295) pilG 3495089..3495496 (-) 408 WP_339080343.1 twitching motility response regulator PilG Regulator
  WOB24_RS16300 (WOB24_16300) gshB 3495736..3496698 (+) 963 WP_341303950.1 glutathione synthase -
  WOB24_RS16305 (WOB24_16305) - 3496755..3497651 (+) 897 WP_339080345.1 energy transducer TonB -
  WOB24_RS16310 (WOB24_16310) - 3497736..3498305 (+) 570 WP_339080346.1 YqgE/AlgH family protein -
  WOB24_RS16315 (WOB24_16315) ruvX 3498305..3498742 (+) 438 WP_339080347.1 Holliday junction resolvase RuvX -
  WOB24_RS16320 (WOB24_16320) pyrR 3498775..3499281 (+) 507 WP_339080348.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  WOB24_RS16325 (WOB24_16325) - 3499292..3500302 (+) 1011 WP_339080349.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14769.16 Da        Isoelectric Point: 7.2440

>NTDB_id=973537 WOB24_RS16295 WP_339080343.1 3495089..3495496(-) (pilG) [Pseudomonas sp. TMP25]
MEQHSEGLRVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADTHPSIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPGFVPVEQSS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=973537 WOB24_RS16295 WP_339080343.1 3495089..3495496(-) (pilG) [Pseudomonas sp. TMP25]
ATGGAACAGCATTCCGAGGGTTTGAGGGTGATGGTGATCGACGATTCGAAAACGATTCGTCGTACCGCGGAAACCCTGCT
GAAAAAAGTGGGCTGCGAAGTAATTACCGCAGTTGACGGTTTCGATGCGTTAGCAAAGATCGCTGATACCCATCCAAGCA
TCATTTTTGTCGACATTATGATGCCGCGGCTTGACGGATATCAGACCTGCGCCTTGATTAAAAACAACAGCGCTTTTAAA
TCCACTCCGGTGATCATGCTGTCTTCTAAAGACGGCCTGTTCGATAAAGCTAAGGGGCGCATCGTCGGCTCAGATCAATA
CCTGACTAAGCCCTTTAGCAAAGAAGAGCTGCTCGGTGCGATCAAAGCCCATGTGCCTGGCTTTGTACCGGTGGAACAAT
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.735

86.667

0.37

Multiple sequence alignment