Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   ACL6EQ_RS15485 Genome accession   NZ_CP178716
Coordinates   2980584..2981453 (-) Length   289 a.a.
NCBI ID   WP_015714626.1    Uniprot ID   C0JBL3
Organism   Bacillus subtilis strain SY1483     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 2975584..2986453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6EQ_RS15450 (ACL6EQ_15450) mrpE 2975757..2976233 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ACL6EQ_RS15455 (ACL6EQ_15455) mrpF 2976233..2976517 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ACL6EQ_RS15460 (ACL6EQ_15460) mnhG 2976501..2976875 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  ACL6EQ_RS15465 (ACL6EQ_15465) yuxO 2976914..2977294 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  ACL6EQ_RS15470 (ACL6EQ_15470) comA 2977313..2977957 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ACL6EQ_RS15475 (ACL6EQ_15475) comP 2978038..2980350 (-) 2313 WP_099085219.1 histidine kinase Regulator
  ACL6EQ_RS15480 (ACL6EQ_15480) comX 2980366..2980587 (-) 222 WP_014114983.1 competence pheromone ComX -
  ACL6EQ_RS15485 (ACL6EQ_15485) comQ 2980584..2981453 (-) 870 WP_015714626.1 polyprenyl synthetase family protein Regulator
  ACL6EQ_RS15490 (ACL6EQ_15490) degQ 2981638..2981778 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ACL6EQ_RS15495 (ACL6EQ_15495) - 2982000..2982062 (+) 63 Protein_3012 hypothetical protein -
  ACL6EQ_RS15500 (ACL6EQ_15500) - 2982240..2982608 (+) 369 WP_327826230.1 hypothetical protein -
  ACL6EQ_RS15505 (ACL6EQ_15505) pdeH 2982584..2983813 (-) 1230 WP_024572553.1 cyclic di-GMP phosphodiesterase -
  ACL6EQ_RS15510 (ACL6EQ_15510) pncB 2983950..2985422 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  ACL6EQ_RS15515 (ACL6EQ_15515) pncA 2985438..2985989 (-) 552 WP_014477836.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 289 a.a.        Molecular weight: 33019.53 Da        Isoelectric Point: 4.6894

>NTDB_id=972889 ACL6EQ_RS15485 WP_015714626.1 2980584..2981453(-) (comQ) [Bacillus subtilis strain SY1483]
MKEIVDENISNEDLKTKLISFIEEKKQFSFAELAYHHYIAFDGKDVTAIELLASGIELLILSADIFDDIEDKDNLQASWM
KIDPSIVINAATTLYTLSLQVISLVSNNPQLLSLTLQYSLQSLQGQHADLNVKISSESEYIEMIKLKSGSLVTLPSVLGV
YLATGEINETVEEYSLYLGIVEQIANDHHGLYYPDNNDIKTRHNLAFYYLKNKYNQSSIDLLNFYAQENNQINNMDELKK
RLQGSGVIQYLNVIKNIALENFKESFKKLRLDEQRKNKLLDQLLRGNIN

Nucleotide


Download         Length: 870 bp        

>NTDB_id=972889 ACL6EQ_RS15485 WP_015714626.1 2980584..2981453(-) (comQ) [Bacillus subtilis strain SY1483]
ATGAAGGAGATTGTAGATGAAAATATTTCAAATGAAGACTTAAAAACAAAACTTATTTCTTTTATTGAAGAAAAAAAACA
ATTTTCATTTGCAGAATTAGCTTATCACCATTACATAGCATTTGACGGAAAAGATGTTACAGCAATTGAGTTGTTGGCTT
CTGGTATAGAACTTTTAATTTTATCTGCTGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAAATAGATCCTTCGATAGTGATTAACGCAGCTACTACACTTTATACATTAAGTTTGCAAGTGATAAGTTTAGTTTCAAA
CAATCCGCAACTTCTAAGTCTGACTTTACAATATTCACTTCAATCTTTACAAGGGCAACATGCAGATTTAAATGTAAAAA
TCTCTTCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCAGGTTCTCTTGTAACATTGCCTAGTGTTCTTGGTGTA
TATTTGGCAACTGGAGAAATTAATGAAACAGTCGAGGAGTATTCACTTTATTTGGGTATAGTCGAGCAAATTGCGAATGA
TCACCATGGGCTATATTATCCTGACAATAATGACATAAAAACTAGACACAATCTTGCCTTCTACTATCTAAAAAATAAAT
ATAACCAATCATCGATTGACTTATTAAATTTTTATGCGCAAGAAAATAATCAGATAAATAACATGGATGAATTGAAAAAG
AGGTTACAAGGATCAGGTGTAATCCAATACCTGAATGTTATTAAAAATATAGCACTGGAAAATTTTAAAGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAGAATAAACTACTTGATCAATTATTAAGGGGGAATATAAATTGA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0JBL3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

43.056

99.654

0.429