Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   WN777_RS20735 Genome accession   NZ_CP150839
Coordinates   4045216..4046010 (-) Length   264 a.a.
NCBI ID   WP_014297988.1    Uniprot ID   A0A1J9YJW5
Organism   Bacillus pacificus strain SG15     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4040216..4051010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WN777_RS20710 (WN777_20695) yqiS 4040459..4041358 (-) 900 WP_000763072.1 phosphate butyryltransferase -
  WN777_RS20715 (WN777_20700) - 4041554..4043626 (-) 2073 WP_139866722.1 sigma-54-dependent Fis family transcriptional regulator -
  WN777_RS20720 (WN777_20705) - 4043763..4043996 (+) 234 WP_098667350.1 DUF2627 domain-containing protein -
  WN777_RS20725 (WN777_20710) - 4044046..4044774 (-) 729 WP_139866720.1 glycerophosphodiester phosphodiesterase -
  WN777_RS20730 (WN777_20715) - 4044825..4044971 (+) 147 WP_001247671.1 YycC family protein -
  WN777_RS20735 (WN777_20720) spo0A 4045216..4046010 (-) 795 WP_014297988.1 sporulation transcription factor Spo0A Regulator
  WN777_RS20740 (WN777_20725) spoIVB 4046298..4047596 (-) 1299 WP_242294004.1 SpoIVB peptidase -
  WN777_RS20745 (WN777_20730) recN 4047715..4049454 (-) 1740 WP_000947752.1 DNA repair protein RecN Machinery gene
  WN777_RS20750 (WN777_20735) argR 4049722..4050171 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4719

>NTDB_id=972839 WN777_RS20735 WP_014297988.1 4045216..4046010(-) (spo0A) [Bacillus pacificus strain SG15]
MEKIKVCLVDDNKELVSMLESYVAAQEDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=972839 WN777_RS20735 WP_014297988.1 4045216..4046010(-) (spo0A) [Bacillus pacificus strain SG15]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
GGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TGTTAGATATTATTATGCCACATTTAGATGGGTTAGCTGTACTAGAGAAAATGCGCCATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCGTTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCGTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGATATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAAAAATATAATACAACAGCAAGCCGTGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGCGGGAATATCGATTCTATTTCGTCCTTATTCGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9YJW5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.273

100

0.822

Multiple sequence alignment