Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   WNC56_RS15455 Genome accession   NZ_CP150833
Coordinates   2974966..2977278 (-) Length   770 a.a.
NCBI ID   WP_073207243.1    Uniprot ID   -
Organism   Bacillus safensis strain DMB13     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2969966..2982278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WNC56_RS15415 (WNC56_15380) - 2970371..2970802 (+) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -
  WNC56_RS15420 (WNC56_15385) - 2970802..2971143 (+) 342 WP_048237322.1 Na(+)/H(+) antiporter subunit C -
  WNC56_RS15425 (WNC56_15390) - 2971136..2972614 (+) 1479 WP_406845826.1 Na+/H+ antiporter subunit D -
  WNC56_RS15430 (WNC56_15395) - 2972621..2973100 (+) 480 WP_024423318.1 Na+/H+ antiporter subunit E -
  WNC56_RS15435 (WNC56_15400) - 2973100..2973381 (+) 282 WP_024423319.1 Na(+)/H(+) antiporter subunit F1 -
  WNC56_RS15440 (WNC56_15405) mnhG 2973365..2973739 (+) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  WNC56_RS15445 (WNC56_15410) - 2973831..2974220 (-) 390 WP_024423321.1 hotdog fold thioesterase -
  WNC56_RS15450 (WNC56_15415) comA 2974244..2974885 (-) 642 WP_024423322.1 response regulator transcription factor Regulator
  WNC56_RS15455 (WNC56_15420) comP 2974966..2977278 (-) 2313 WP_073207243.1 ATP-binding protein Regulator
  WNC56_RS15460 (WNC56_15425) comX 2977332..2977502 (-) 171 WP_073207246.1 competence pheromone ComX -
  WNC56_RS15465 (WNC56_15430) - 2977499..2978413 (-) 915 WP_024423324.1 polyprenyl synthetase family protein -
  WNC56_RS15470 (WNC56_15435) degQ 2978565..2978705 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  WNC56_RS15475 (WNC56_15440) - 2979211..2979567 (+) 357 WP_151039930.1 inner spore coat protein -
  WNC56_RS15480 (WNC56_15445) - 2979603..2980829 (-) 1227 WP_024423326.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89508.08 Da        Isoelectric Point: 7.5085

>NTDB_id=972796 WNC56_RS15455 WP_073207243.1 2974966..2977278(-) (comP) [Bacillus safensis strain DMB13]
MKITYTKLSAFLVFLSFLFVIYVSYIYVFDIFNGARVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGEPANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYIIPLILYSICLFCIFFIIRINKEAQRKSAFLLVVFLLTICIGY
LSAGTSGIGERFSHYVITFCLSSVFVFYIHFIYQYFKEFDLHITTQKTIRFLYSLPIINLVIELFVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMRKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLKYYGFLAITPTVFVVVTFYILQKPEDLKYTLKLALITYTLMLAVFYFKEILDFRFRLKRFSEKH
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIIEIDESTNDSKLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFIICCLSNIQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLDDLKQREANPAWLKKI
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNDQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKATQVLVMLICIKDQVVLHYEDD
GVGFDASHLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=972796 WNC56_RS15455 WP_073207243.1 2974966..2977278(-) (comP) [Bacillus safensis strain DMB13]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTAGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTAGCGGAGAACAAGAACGGTCAAGCAGAAGTTGTCAAAGTTGAGTATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGGGAACCTGCTAACAACAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATATAATTCCTCTCATCCTGTATTCAATTTGTTTATTTTGTATCTTCTTTA
TCATTCGAATTAACAAAGAGGCCCAACGAAAATCAGCATTTCTTTTAGTTGTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACTTCAGGTATTGGTGAAAGATTTAGCCATTATGTAATTACATTTTGTTTATCAAGTGTATTTGTCTT
TTATATTCATTTCATTTATCAATATTTCAAAGAGTTTGACCTGCATATAACGACTCAAAAAACAATTCGCTTTTTATATA
GTCTTCCTATAATTAATCTAGTAATAGAGTTATTTGTTCCGATTGATTCAGCGATAGCCAGATACATGCCAAGTTTAAAT
CTTTTATTCTTTTTCGCTTCTATTATCATGTCATTCAAAGTGATTATCAATGGAATGCGGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATAAATATCATAGCATTTTGTCCATTTATCTTTTTATTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTGGTAGATCCCTTTTTCTTAACTTCTTTTGTCTTGCTCATTCCTTTTTCACTCGTGTATCAA
TTTATGACGAACAAGCTTTACAATATGGATTTTTTGATAAGCAGACTGAAATACTATGGGTTTCTTGCCATTACACCGAC
CGTTTTTGTTGTTGTCACGTTTTACATTCTGCAAAAACCAGAAGATTTGAAGTACACACTGAAGCTCGCATTAATCACCT
ATACACTCATGTTGGCTGTATTCTATTTCAAAGAAATTCTAGATTTCCGCTTCCGTCTGAAGCGTTTTTCAGAAAAGCAT
AATTACCAGGACAGTGTGTTTAAATTCACGCAGCTCATTCGTGAGGCGTCCTCACTTCATCAAGTGCTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTTGTTGTGAATAAAGCCTTTGTGCTTGAGGTGAAAGCTGACGGACAAATTATTGAAATTG
ATGAATCGACAAATGATAGTAAGCTATGGAAAGAATACGTGGATCAATTTCAAGATATTTTAGGTGAAGTCGGGAAAATT
ATTGAGCTTGATAAAGGGTTTATGATGAAAATTGGCGAACGGGGCGGTCACTCGTTTATCATTTGCTGCTTATCCAATAT
ACAGACACCGAAATTGACGCGTGATGAGATTTCTTGGCTGAAAACATTGGCCTTTTATACAAGTGTCAGTTTAGAAAATG
TCGTCAAAATTGAAGAGTTGATGGAGCATCTTGACGATTTGAAACAGCGTGAGGCCAATCCTGCCTGGCTGAAGAAAATC
ATGTTTGCTATGGAAGAAAAGCAGCGTTCAGATTTAGCGAGAGATCTTCATGATTCCGTGCTGCAGGACTTGATATCACT
AAAAAGGCAGTCGGAGATGTTTTTAACGAATTTCCAAAACAACCAATGCCCGACATCTATTGAAAATTCGCTTATCTCAT
GGAATGATCAAATGTCCAAAGTGATTCAAACGACGAGAGAAACGTGTCATGAGCTTCGCCCGCAGCTGCTGTATGATTTA
GGTTTAGTAAAGGCGATATCGAAGCTGACTTCTCAAATTCAGGAGGAAGCGCCGTTTCATATTAGGCTGAATACGACACG
CTTTGATAAAGAATTGGACATTGATATTGATTCACAGCTGAATATTTACCGAATTGTTCAGGAGCTGTTATCCAACGCCC
TGAAGCACTCAAAAGCCACTCAAGTGTTAGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTATGAGGATGAT
GGAGTCGGTTTTGATGCCAGTCATCTTGATCAGCACACAATGAGCATGGGGCTATCGGGTATTAGAGAACGAGTGAAAGC
GTTAAATGGAAAGCTTCAAATTCACACAGCCCCGGAAAAAGGGCTTAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.645

100

0.49


Multiple sequence alignment