Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | AABD45_RS00730 | Genome accession | NZ_CP150831 |
| Coordinates | 131179..131796 (-) | Length | 205 a.a. |
| NCBI ID | WP_011079558.1 | Uniprot ID | Q7MHU7 |
| Organism | Vibrio vulnificus strain Per1 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 126179..136796
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABD45_RS00720 (AABD45_00720) | aceF | 127452..129362 (+) | 1911 | WP_406849131.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| AABD45_RS00725 (AABD45_00725) | lpdA | 129620..131047 (+) | 1428 | WP_011079557.1 | dihydrolipoyl dehydrogenase | - |
| AABD45_RS00730 (AABD45_00730) | opaR | 131179..131796 (-) | 618 | WP_011079558.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| AABD45_RS00735 (AABD45_00735) | hpt | 132188..132718 (+) | 531 | WP_011079559.1 | hypoxanthine phosphoribosyltransferase | - |
| AABD45_RS00740 (AABD45_00740) | can | 132817..133485 (-) | 669 | WP_013571146.1 | carbonate dehydratase | - |
| AABD45_RS00745 (AABD45_00745) | - | 133727..135397 (+) | 1671 | WP_406849132.1 | SulP family inorganic anion transporter | - |
| AABD45_RS00750 (AABD45_00750) | - | 135565..136488 (+) | 924 | WP_017421202.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23717.02 Da Isoelectric Point: 6.1461
>NTDB_id=972716 AABD45_RS00730 WP_011079558.1 131179..131796(-) (opaR) [Vibrio vulnificus strain Per1]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHAKENIANITNAMIELVVQDNHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHNPE
DLANLFHGICYSLFVQANRTNNTAELSKLVSSYLDMLCIYKREHE
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHAKENIANITNAMIELVVQDNHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHNPE
DLANLFHGICYSLFVQANRTNNTAELSKLVSSYLDMLCIYKREHE
Nucleotide
Download Length: 618 bp
>NTDB_id=972716 AABD45_RS00730 WP_011079558.1 131179..131796(-) (opaR) [Vibrio vulnificus strain Per1]
ATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCACTAAAACGTAAACAGCAGCTCATGGAAATTGCACTGGA
AGTGTTTGCTCGTCGTGGCATTGGCCGCGGTGGTCACGCAGACATCGCTGAAATTGCGCAAGTTTCTGTGGCGACCGTCT
TCAACTACTTCCCAACTCGCGAAGATCTTGTAGACGAAGTGCTTAATCATGTCGTTCGTCAGTTTTCTAATTTCCTATCT
GACAACATCGATTTGGATCTTCACGCTAAAGAAAACATCGCCAACATCACCAACGCAATGATTGAGCTTGTGGTGCAAGA
CAATCACTGGTTGAAAGTTTGGTTCGAGTGGAGTGCGTCAACGCGTGACGAAGTTTGGCCTCTGTTTGTCACCACCAACC
GCACTAATCAGTTGCTGGTACAAAACATGTTCATCAAAGCCATTGAACGCGGTGAAGTGTGTGATCAACACAACCCAGAA
GATTTGGCAAACCTGTTCCACGGCATTTGTTACTCGCTGTTTGTTCAAGCAAACCGCACCAACAATACTGCAGAGCTGAG
CAAACTGGTCAGCAGCTACTTAGACATGCTATGCATCTATAAACGCGAACACGAATAG
ATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCACTAAAACGTAAACAGCAGCTCATGGAAATTGCACTGGA
AGTGTTTGCTCGTCGTGGCATTGGCCGCGGTGGTCACGCAGACATCGCTGAAATTGCGCAAGTTTCTGTGGCGACCGTCT
TCAACTACTTCCCAACTCGCGAAGATCTTGTAGACGAAGTGCTTAATCATGTCGTTCGTCAGTTTTCTAATTTCCTATCT
GACAACATCGATTTGGATCTTCACGCTAAAGAAAACATCGCCAACATCACCAACGCAATGATTGAGCTTGTGGTGCAAGA
CAATCACTGGTTGAAAGTTTGGTTCGAGTGGAGTGCGTCAACGCGTGACGAAGTTTGGCCTCTGTTTGTCACCACCAACC
GCACTAATCAGTTGCTGGTACAAAACATGTTCATCAAAGCCATTGAACGCGGTGAAGTGTGTGATCAACACAACCCAGAA
GATTTGGCAAACCTGTTCCACGGCATTTGTTACTCGCTGTTTGTTCAAGCAAACCGCACCAACAATACTGCAGAGCTGAG
CAAACTGGTCAGCAGCTACTTAGACATGCTATGCATCTATAAACGCGAACACGAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
92.157 |
99.512 |
0.917 |
| hapR | Vibrio cholerae C6706 |
72.864 |
97.073 |
0.707 |
| hapR | Vibrio cholerae strain A1552 |
72.864 |
97.073 |
0.707 |