Detailed information NTG0097259

Bioinformatically predicted

Overview

• Name: pilH
• Type: Machinery gene
• Locus tag: AACJ17_RS05945
• Genome accession: NZ_AP029010
• Coordinates: 1232937..1233305 (+)
• Length: 122 a.a.
• NCBI ID: WP_003269243.1
• Uniprot ID: Q8Y1M1
• Organism: Ralstonia pseudosolanacearum strain MAFF 301524
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1227937..1238305

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACJ17_RS05920 (MAFF301524_11600)	-	1228428..1229054 (-)	627	WP_016723449.1	LemA family protein	-
AACJ17_RS05925 (MAFF301524_11610)	dapA	1229435..1230349 (+)	915	WP_020831380.1	4-hydroxy-tetrahydrodipicolinate synthase	-
AACJ17_RS05930 (MAFF301524_11620)	hemL	1230452..1231753 (-)	1302	WP_111374466.1	glutamate-1-semialdehyde 2,1-aminomutase	-
AACJ17_RS05935 (MAFF301524_11630)	-	1231965..1232147 (+)	183	WP_003261842.1	rubredoxin	-
AACJ17_RS05940 (MAFF301524_11640)	pilG	1232438..1232905 (+)	468	WP_016723446.1	response regulator	Regulator
AACJ17_RS05945 (MAFF301524_11650)	pilH	1232937..1233305 (+)	369	WP_003269243.1	response regulator	Machinery gene
AACJ17_RS05950 (MAFF301524_11660)	-	1233364..1233909 (+)	546	WP_011000625.1	chemotaxis protein CheW	-
AACJ17_RS05955 (MAFF301524_11670)	-	1234155..1236386 (+)	2232	WP_011000626.1	methyl-accepting chemotaxis protein	-

Sequence

Protein

• Length: 122 a.a.
• Molecular weight: 13482.73 Da
• Isoelectric Point: 4.9328

>NTDB_id=97259 AACJ17_RS05945 WP_003269243.1 1232937..1233305(+) (pilH) [Ralstonia pseudosolanacearum strain MAFF 301524]
MAIKKILVVDDSPTEALFLSEILSKNGFKVSVAADSDQAMAKLEGEPFDLVLMDVVMPGQNGYQATRAIKKDDRFKDIPV
IICTTKGLETDRVWGMRQGASDYIVKPVKAEELLEKIAKLPQ

Nucleotide

• Length: 369 bp

>NTDB_id=97259 AACJ17_RS05945 WP_003269243.1 1232937..1233305(+) (pilH) [Ralstonia pseudosolanacearum strain MAFF 301524]
ATGGCAATCAAAAAGATTCTGGTGGTTGATGACTCCCCCACCGAAGCACTGTTCCTGTCGGAAATCCTGAGCAAGAACGG
TTTCAAGGTGTCGGTCGCGGCCGACAGCGACCAGGCCATGGCCAAGCTGGAAGGCGAGCCTTTCGACCTGGTCCTGATGG
ACGTGGTGATGCCCGGCCAGAACGGCTACCAGGCCACCCGCGCGATCAAGAAGGACGATCGCTTCAAGGACATCCCGGTG
ATCATCTGCACCACCAAGGGCCTGGAGACCGACCGCGTGTGGGGCATGCGCCAGGGCGCGTCGGACTACATCGTCAAGCC
GGTCAAGGCAGAAGAGCTGCTCGAAAAGATCGCCAAGCTGCCGCAGTAA

Domains

Predicted by InterProScan.

• Response regulator receiver domain (Response_reg) (6-117)

3D structure

• AlphaFold DB: Q8Y1M1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilH	Synechocystis sp. PCC 6803	44.915	96.721	0.434