Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AACJ17_RS05940 Genome accession   NZ_AP029010
Coordinates   1232438..1232905 (+) Length   155 a.a.
NCBI ID   WP_016723446.1    Uniprot ID   -
Organism   Ralstonia pseudosolanacearum strain MAFF 301524     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1227438..1237905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACJ17_RS05915 (MAFF301524_11590) - 1227567..1228415 (-) 849 WP_020831378.1 YgcG family protein -
  AACJ17_RS05920 (MAFF301524_11600) - 1228428..1229054 (-) 627 WP_016723449.1 LemA family protein -
  AACJ17_RS05925 (MAFF301524_11610) dapA 1229435..1230349 (+) 915 WP_020831380.1 4-hydroxy-tetrahydrodipicolinate synthase -
  AACJ17_RS05930 (MAFF301524_11620) hemL 1230452..1231753 (-) 1302 WP_111374466.1 glutamate-1-semialdehyde 2,1-aminomutase -
  AACJ17_RS05935 (MAFF301524_11630) - 1231965..1232147 (+) 183 WP_003261842.1 rubredoxin -
  AACJ17_RS05940 (MAFF301524_11640) pilG 1232438..1232905 (+) 468 WP_016723446.1 response regulator Regulator
  AACJ17_RS05945 (MAFF301524_11650) pilH 1232937..1233305 (+) 369 WP_003269243.1 response regulator Machinery gene
  AACJ17_RS05950 (MAFF301524_11660) - 1233364..1233909 (+) 546 WP_011000625.1 chemotaxis protein CheW -
  AACJ17_RS05955 (MAFF301524_11670) - 1234155..1236386 (+) 2232 WP_011000626.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 16767.51 Da        Isoelectric Point: 8.2887

>NTDB_id=97258 AACJ17_RS05940 WP_016723446.1 1232438..1232905(+) (pilG) [Ralstonia pseudosolanacearum strain MAFF 301524]
MVAQRENMMQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCD
ILMPKLDGYLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ

Nucleotide


Download         Length: 468 bp        

>NTDB_id=97258 AACJ17_RS05940 WP_016723446.1 1232438..1232905(+) (pilG) [Ralstonia pseudosolanacearum strain MAFF 301524]
GTGGTCGCGCAACGCGAGAACATGATGCAATCCGCGCGGGTGGAACAACTGACCAATTCCCAACCGCTGGCGAGTTCGCT
TGCCGGCCGTAAAGTGCTGGTGATCGACGATTCCAGTACCATCCGCCGTACCGCGCAGATTTTCCTGTCCAAGGTCGATT
GCCAGGTCGTGCTGGCCGAAGACGGGTTCGATGCGCTGGCCAAGCTGGGTGACTTCAAGCCGGACATCGTCTTTTGCGAC
ATCCTGATGCCCAAGCTGGACGGTTACCTGACCTGCTCACTGATCAAGAAAAGCCCGAAGTTTCATGCCACGCCCGTGGT
CATGCTGTCGTCGCGCGACGGGGTGTTCGACCGCGCGCGCGGCAAGCTGGTCGGGGCGGTGGACCACCTTGCCAAGCCTT
TCTCGCGGGAAGCGCTGCTGGAGGCGGTCCAGGCGCATCTGCCGGCAGCCGCTGGCGCCGCGCAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(32-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

54.622

76.774

0.419

Multiple sequence alignment