Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | WOC49_RS06150 | Genome accession | NZ_CP150783 |
| Coordinates | 1251358..1251753 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM20818 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1246358..1256753
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WOC49_RS06120 (WOC49_06130) | - | 1247616..1248020 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| WOC49_RS06125 (WOC49_06135) | - | 1248358..1248450 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| WOC49_RS06130 (WOC49_06140) | - | 1248582..1248815 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| WOC49_RS06135 (WOC49_06145) | murA | 1248926..1250191 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| WOC49_RS06140 (WOC49_06150) | fabZ | 1250225..1250665 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| WOC49_RS06145 (WOC49_06155) | - | 1250724..1251164 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| WOC49_RS06150 (WOC49_06160) | ssb | 1251358..1251753 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| WOC49_RS06155 (WOC49_06165) | sceD | 1252142..1252837 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| WOC49_RS06160 (WOC49_06170) | tenA | 1253223..1253912 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| WOC49_RS06165 (WOC49_06175) | thiD | 1253905..1254735 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WOC49_RS06170 (WOC49_06180) | thiM | 1254719..1255510 (+) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| WOC49_RS06175 (WOC49_06185) | thiE | 1255512..1256153 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=972566 WOC49_RS06150 WP_000932694.1 1251358..1251753(+) (ssb) [Staphylococcus aureus strain TUM20818]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=972566 WOC49_RS06150 WP_000932694.1 1251358..1251753(+) (ssb) [Staphylococcus aureus strain TUM20818]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |