Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | WOC48_RS11870 | Genome accession | NZ_CP150777 |
| Coordinates | 2411050..2411445 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932692.1 | Uniprot ID | A0A641A2P1 |
| Organism | Staphylococcus aureus strain TUM20825 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2406050..2416445
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WOC48_RS11840 (WOC48_11815) | - | 2407309..2407713 (+) | 405 | WP_261921282.1 | F0F1 ATP synthase subunit epsilon | - |
| WOC48_RS11845 (WOC48_11820) | - | 2408051..2408143 (+) | 93 | WP_031864518.1 | hypothetical protein | - |
| WOC48_RS11850 (WOC48_11825) | - | 2408275..2408508 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| WOC48_RS11855 (WOC48_11830) | murA | 2408619..2409884 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| WOC48_RS11860 (WOC48_11835) | fabZ | 2409918..2410358 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| WOC48_RS11865 (WOC48_11840) | - | 2410416..2410856 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| WOC48_RS11870 (WOC48_11845) | ssb | 2411050..2411445 (+) | 396 | WP_000932692.1 | single-stranded DNA-binding protein | Machinery gene |
| WOC48_RS11875 (WOC48_11850) | sceD | 2411834..2412529 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| WOC48_RS11880 (WOC48_11855) | tenA | 2413053..2413742 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| WOC48_RS11885 (WOC48_11860) | thiD | 2413735..2414565 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WOC48_RS11890 (WOC48_11865) | thiM | 2414549..2415349 (+) | 801 | WP_368409644.1 | hydroxyethylthiazole kinase | - |
| WOC48_RS11895 (WOC48_11870) | thiE | 2415342..2415983 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15114.16 Da Isoelectric Point: 5.2452
>NTDB_id=972456 WOC48_RS11870 WP_000932692.1 2411050..2411445(+) (ssb) [Staphylococcus aureus strain TUM20825]
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=972456 WOC48_RS11870 WP_000932692.1 2411050..2411445(+) (ssb) [Staphylococcus aureus strain TUM20825]
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |