Detailed information NTG0972371

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACLZ0H_RS22630
• Genome accession: NZ_CP178548
• Coordinates: 4676440..4677465 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain WWCOL-256
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4671440..4682465

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLZ0H_RS22620 (ACLZ0H_22620)	rpmE	4673671..4673883 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACLZ0H_RS22625 (ACLZ0H_22625)	priA	4674086..4676284 (+)	2199	WP_001315935.1	primosomal protein N'	Machinery gene
ACLZ0H_RS22630 (ACLZ0H_22630)	cytR	4676440..4677465 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACLZ0H_RS22635 (ACLZ0H_22635)	ftsN	4677557..4678516 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACLZ0H_RS22640 (ACLZ0H_22640)	hslV	4678609..4679139 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACLZ0H_RS22645 (ACLZ0H_22645)	hslU	4679149..4680480 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ACLZ0H_RS22650 (ACLZ0H_22650)	menA	4680547..4681473 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACLZ0H_RS22655 (ACLZ0H_22655)	rraA	4681566..4682051 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACLZ0H_RS22660 (ACLZ0H_22660)	zapB	4682136..4682381 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=972371 ACLZ0H_RS22630 WP_000644904.1 4676440..4677465(+) (cytR) [Escherichia coli strain WWCOL-256]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=972371 ACLZ0H_RS22630 WP_000644904.1 4676440..4677465(+) (cytR) [Escherichia coli strain WWCOL-256]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628