Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   ACLZ2J_RS09640 Genome accession   NZ_CP178514
Coordinates   1898919..1900922 (+) Length   667 a.a.
NCBI ID   WP_003245397.1    Uniprot ID   P45694
Organism   Bacillus subtilis strain BS18-1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1893919..1905922
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLZ2J_RS09600 pghL 1894279..1895037 (+) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  ACLZ2J_RS09605 - 1895064..1895513 (-) 450 WP_003245454.1 YndM family protein -
  ACLZ2J_RS09610 fosM 1895721..1896155 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  ACLZ2J_RS09615 - 1896064..1896360 (+) 297 WP_223257629.1 hypothetical protein -
  ACLZ2J_RS09620 dinR/lexA 1896697..1897314 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  ACLZ2J_RS09625 yneA 1897464..1897781 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  ACLZ2J_RS09630 dinL 1897800..1898453 (+) 654 WP_003231596.1 recombinase family protein -
  ACLZ2J_RS09635 ynzC 1898517..1898750 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  ACLZ2J_RS09640 recP/tkt 1898919..1900922 (+) 2004 WP_003245397.1 transketolase Machinery gene
  ACLZ2J_RS09645 sirA 1901075..1901521 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ACLZ2J_RS09650 yneF 1901607..1901825 (+) 219 WP_003221221.1 YneF family protein -
  ACLZ2J_RS09655 ynzD 1901899..1902072 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  ACLZ2J_RS09660 ccdA 1902292..1902999 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  ACLZ2J_RS09665 yneI 1903088..1903450 (+) 363 WP_003245707.1 response regulator -
  ACLZ2J_RS09670 yneJ 1903529..1904020 (+) 492 WP_010886519.1 CcdC family protein -
  ACLZ2J_RS09675 yneK 1904051..1904479 (-) 429 WP_003231580.1 DynA interaction protein YneK -
  ACLZ2J_RS09680 cotM 1904713..1905105 (-) 393 WP_010886520.1 outer spore coat protein CotM -
  ACLZ2J_RS09685 sspP 1905186..1905332 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  ACLZ2J_RS09690 sspO 1905364..1905510 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72344.44 Da        Isoelectric Point: 4.7291

>NTDB_id=972137 ACLZ2J_RS09640 WP_003245397.1 1898919..1900922(+) (recP/tkt) [Bacillus subtilis strain BS18-1]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAVAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTSEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=972137 ACLZ2J_RS09640 WP_003245397.1 1898919..1900922(+) (recP/tkt) [Bacillus subtilis strain BS18-1]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAAGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGTAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGTTTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCGGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACATCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCTTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCTGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P45694

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562


Multiple sequence alignment