Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   ACLZ2J_RS09620 Genome accession   NZ_CP178514
Coordinates   1896697..1897314 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain BS18-1     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1891697..1902314
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLZ2J_RS09590 yndJ 1892011..1893651 (+) 1641 WP_003231612.1 YndJ family protein -
  ACLZ2J_RS09595 - 1893739..1894053 (+) 315 WP_003245621.1 hypothetical protein -
  ACLZ2J_RS09600 pghL 1894279..1895037 (+) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  ACLZ2J_RS09605 - 1895064..1895513 (-) 450 WP_003245454.1 YndM family protein -
  ACLZ2J_RS09610 fosM 1895721..1896155 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  ACLZ2J_RS09615 - 1896064..1896360 (+) 297 WP_223257629.1 hypothetical protein -
  ACLZ2J_RS09620 dinR/lexA 1896697..1897314 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  ACLZ2J_RS09625 yneA 1897464..1897781 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  ACLZ2J_RS09630 dinL 1897800..1898453 (+) 654 WP_003231596.1 recombinase family protein -
  ACLZ2J_RS09635 ynzC 1898517..1898750 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  ACLZ2J_RS09640 recP/tkt 1898919..1900922 (+) 2004 WP_003245397.1 transketolase Machinery gene
  ACLZ2J_RS09645 sirA 1901075..1901521 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ACLZ2J_RS09650 yneF 1901607..1901825 (+) 219 WP_003221221.1 YneF family protein -
  ACLZ2J_RS09655 ynzD 1901899..1902072 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=972136 ACLZ2J_RS09620 WP_003238209.1 1896697..1897314(-) (dinR/lexA) [Bacillus subtilis strain BS18-1]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=972136 ACLZ2J_RS09620 WP_003238209.1 1896697..1897314(-) (dinR/lexA) [Bacillus subtilis strain BS18-1]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGTTCTACTGTCCACGGCCATTTGGCCCGTTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1