Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | WOC43_RS07655 | Genome accession | NZ_CP150749 |
| Coordinates | 1566484..1566879 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM22699 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1561484..1571879
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WOC43_RS07625 (WOC43_07635) | - | 1562742..1563146 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| WOC43_RS07630 (WOC43_07640) | - | 1563484..1563576 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| WOC43_RS07635 (WOC43_07645) | - | 1563708..1563941 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| WOC43_RS07640 (WOC43_07650) | murA | 1564052..1565317 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| WOC43_RS07645 (WOC43_07655) | fabZ | 1565351..1565791 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| WOC43_RS07650 (WOC43_07660) | - | 1565850..1566290 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| WOC43_RS07655 (WOC43_07665) | ssb | 1566484..1566879 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| WOC43_RS07660 (WOC43_07670) | sceD | 1567268..1567963 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| WOC43_RS07665 (WOC43_07675) | tenA | 1568349..1569038 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| WOC43_RS07670 (WOC43_07680) | thiD | 1569031..1569861 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WOC43_RS07675 (WOC43_07685) | thiM | 1569845..1570636 (+) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| WOC43_RS07680 (WOC43_07690) | thiE | 1570638..1571279 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=971743 WOC43_RS07655 WP_000932694.1 1566484..1566879(+) (ssb) [Staphylococcus aureus strain TUM22699]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=971743 WOC43_RS07655 WP_000932694.1 1566484..1566879(+) (ssb) [Staphylococcus aureus strain TUM22699]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |