Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | WOC54_RS08785 | Genome accession | NZ_CP150747 |
| Coordinates | 1790004..1790399 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM22701 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1785004..1795399
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WOC54_RS08755 (WOC54_08780) | - | 1786262..1786666 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| WOC54_RS08760 (WOC54_08785) | - | 1787004..1787096 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| WOC54_RS08765 (WOC54_08790) | - | 1787228..1787461 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| WOC54_RS08770 (WOC54_08795) | murA | 1787572..1788837 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| WOC54_RS08775 (WOC54_08800) | fabZ | 1788871..1789311 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| WOC54_RS08780 (WOC54_08805) | - | 1789370..1789810 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| WOC54_RS08785 (WOC54_08810) | ssb | 1790004..1790399 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| WOC54_RS08790 (WOC54_08815) | sceD | 1790788..1791483 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| WOC54_RS08795 (WOC54_08820) | tenA | 1791870..1792559 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| WOC54_RS08800 (WOC54_08825) | thiD | 1792552..1793382 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WOC54_RS08805 (WOC54_08830) | thiM | 1793366..1794157 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| WOC54_RS08810 (WOC54_08835) | thiE | 1794159..1794800 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=971703 WOC54_RS08785 WP_000932694.1 1790004..1790399(+) (ssb) [Staphylococcus aureus strain TUM22701]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=971703 WOC54_RS08785 WP_000932694.1 1790004..1790399(+) (ssb) [Staphylococcus aureus strain TUM22701]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |