Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | WOC70_RS10220 | Genome accession | NZ_CP150742 |
| Coordinates | 2093110..2093505 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM22707 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2088110..2098505
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WOC70_RS10190 (WOC70_10190) | - | 2089375..2089779 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| WOC70_RS10195 (WOC70_10195) | - | 2090117..2090209 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| WOC70_RS10200 (WOC70_10200) | - | 2090341..2090574 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| WOC70_RS10205 (WOC70_10205) | murA | 2090685..2091950 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| WOC70_RS10210 (WOC70_10210) | fabZ | 2091984..2092424 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| WOC70_RS10215 (WOC70_10215) | - | 2092476..2092916 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| WOC70_RS10220 (WOC70_10220) | ssb | 2093110..2093505 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| WOC70_RS10225 (WOC70_10225) | sceD | 2093894..2094589 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| WOC70_RS10230 (WOC70_10230) | tenA | 2094976..2095665 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| WOC70_RS10235 (WOC70_10235) | thiD | 2095658..2096488 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WOC70_RS10240 (WOC70_10240) | thiM | 2096472..2097263 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| WOC70_RS10245 (WOC70_10245) | thiE | 2097265..2097906 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=971569 WOC70_RS10220 WP_000932694.1 2093110..2093505(+) (ssb) [Staphylococcus aureus strain TUM22707]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=971569 WOC70_RS10220 WP_000932694.1 2093110..2093505(+) (ssb) [Staphylococcus aureus strain TUM22707]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |