Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | WOC44_RS01465 | Genome accession | NZ_CP150737 |
| Coordinates | 272212..272607 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM22723 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 267212..277607
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WOC44_RS01435 (WOC44_01435) | - | 268469..268873 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| WOC44_RS01440 (WOC44_01440) | - | 269212..269304 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| WOC44_RS01445 (WOC44_01445) | - | 269436..269669 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| WOC44_RS01450 (WOC44_01450) | murA | 269780..271045 (+) | 1266 | WP_000358000.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| WOC44_RS01455 (WOC44_01455) | fabZ | 271079..271519 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| WOC44_RS01460 (WOC44_01460) | - | 271578..272018 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| WOC44_RS01465 (WOC44_01465) | ssb | 272212..272607 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| WOC44_RS01470 (WOC44_01470) | sceD | 272996..273691 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| WOC44_RS01475 (WOC44_01475) | tenA | 274077..274766 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| WOC44_RS01480 (WOC44_01480) | thiD | 274759..275589 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WOC44_RS01485 (WOC44_01485) | thiM | 275573..276364 (+) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| WOC44_RS01490 (WOC44_01490) | thiE | 276366..277007 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=971462 WOC44_RS01465 WP_000932694.1 272212..272607(+) (ssb) [Staphylococcus aureus strain TUM22723]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=971462 WOC44_RS01465 WP_000932694.1 272212..272607(+) (ssb) [Staphylococcus aureus strain TUM22723]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |