Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | WOC46_RS04880 | Genome accession | NZ_CP150733 |
| Coordinates | 1004593..1004988 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932692.1 | Uniprot ID | A0A641A2P1 |
| Organism | Staphylococcus aureus strain TUM22741 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 999593..1009988
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WOC46_RS04850 (WOC46_04850) | - | 1000852..1001256 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| WOC46_RS04855 (WOC46_04855) | - | 1001594..1001686 (+) | 93 | WP_031864518.1 | hypothetical protein | - |
| WOC46_RS04860 (WOC46_04860) | - | 1001818..1002051 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| WOC46_RS04865 (WOC46_04865) | murA | 1002162..1003427 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| WOC46_RS04870 (WOC46_04870) | fabZ | 1003461..1003901 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| WOC46_RS04875 (WOC46_04875) | - | 1003959..1004399 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| WOC46_RS04880 (WOC46_04880) | ssb | 1004593..1004988 (+) | 396 | WP_000932692.1 | single-stranded DNA-binding protein | Machinery gene |
| WOC46_RS04885 (WOC46_04885) | sceD | 1005377..1006072 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| WOC46_RS04890 (WOC46_04890) | tenA | 1006596..1007285 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| WOC46_RS04895 (WOC46_04895) | thiD | 1007278..1008108 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WOC46_RS04900 (WOC46_04900) | thiM | 1008092..1008892 (+) | 801 | WP_001108492.1 | hydroxyethylthiazole kinase | - |
| WOC46_RS04905 (WOC46_04905) | thiE | 1008885..1009526 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15114.16 Da Isoelectric Point: 5.2452
>NTDB_id=971382 WOC46_RS04880 WP_000932692.1 1004593..1004988(+) (ssb) [Staphylococcus aureus strain TUM22741]
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=971382 WOC46_RS04880 WP_000932692.1 1004593..1004988(+) (ssb) [Staphylococcus aureus strain TUM22741]
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |