Detailed information    

insolico Bioinformatically predicted

Overview

Name   sigH   Type   Regulator
Locus tag   UXR81_RS02715 Genome accession   NZ_CP150651
Coordinates   580058..580627 (+) Length   189 a.a.
NCBI ID   WP_000872882.1    Uniprot ID   A0A7U7EXA1
Organism   Staphylococcus aureus strain BSN213     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 575058..585627
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXR81_RS02690 (UXR81_02700) cysE 576271..576918 (+) 648 WP_001805237.1 serine O-acetyltransferase -
  UXR81_RS02695 (UXR81_02705) cysS 576902..578302 (+) 1401 WP_000631969.1 cysteine--tRNA ligase -
  UXR81_RS02700 (UXR81_02710) - 578295..578699 (+) 405 WP_000370182.1 Mini-ribonuclease 3 -
  UXR81_RS02705 (UXR81_02715) rlmB 578707..579453 (+) 747 WP_000390332.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB -
  UXR81_RS02710 (UXR81_02720) - 579453..579977 (+) 525 WP_000664737.1 NYN domain-containing protein -
  UXR81_RS02715 (UXR81_02725) sigH 580058..580627 (+) 570 WP_000872882.1 RNA polymerase sigma factor Regulator
  UXR81_RS02720 (UXR81_02730) rpmG 580742..580885 (+) 144 WP_001788193.1 50S ribosomal protein L33 -
  UXR81_RS02725 (UXR81_02735) secE 580941..581123 (+) 183 WP_001074473.1 preprotein translocase subunit SecE -
  UXR81_RS02730 (UXR81_02740) nusG 581136..581684 (+) 549 WP_001288302.1 transcription termination/antitermination protein NusG -
  UXR81_RS02735 (UXR81_02745) rplK 581865..582287 (+) 423 WP_001085792.1 50S ribosomal protein L11 -
  UXR81_RS02740 (UXR81_02750) rplA 582495..583187 (+) 693 WP_001074619.1 50S ribosomal protein L1 -
  UXR81_RS02745 (UXR81_02755) rplJ 583458..583958 (+) 501 WP_001273085.1 50S ribosomal protein L10 -
  UXR81_RS02750 (UXR81_02760) rplL 584001..584369 (+) 369 WP_001273586.1 50S ribosomal protein L7/L12 -
  UXR81_RS02755 (UXR81_02765) - 584544..585152 (+) 609 WP_000020304.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 189 a.a.        Molecular weight: 23044.91 Da        Isoelectric Point: 9.4170

>NTDB_id=970953 UXR81_RS02715 WP_000872882.1 580058..580627(+) (sigH) [Staphylococcus aureus strain BSN213]
MKYDLTTQDSTIKRNNSINDKDFEKLVMDLQPLIIRRIKTFGFNHYDLEDLYQEILIRMYRSVQTFDFSGEQPFTNYVQC
LITSVKYDYLRKYLATNKRMDNLINEYRVTYPCAIKRFDVENNYLNKLAIKELICQFKYLSAFEKDVMYLMCEQYKPREI
AQLMHVKEKVIYNAIQRCKNKIKRYFKMI

Nucleotide


Download         Length: 570 bp        

>NTDB_id=970953 UXR81_RS02715 WP_000872882.1 580058..580627(+) (sigH) [Staphylococcus aureus strain BSN213]
TTGAAATATGATTTGACAACTCAAGACAGTACAATCAAACGTAACAATTCAATAAATGATAAAGACTTCGAAAAGTTAGT
AATGGATCTACAACCATTAATTATTCGACGCATCAAAACATTTGGATTTAATCATTATGATTTAGAAGACTTATATCAAG
AAATACTTATACGGATGTATAGGTCGGTCCAAACATTTGATTTTAGTGGAGAGCAGCCTTTCACAAATTATGTTCAATGT
TTAATTACGTCTGTAAAGTATGATTATTTGAGAAAATATTTAGCTACAAATAAAAGAATGGATAATTTGATTAATGAATA
TAGAGTTACGTATCCATGTGCAATAAAGCGTTTTGATGTTGAAAACAATTATTTGAATAAATTAGCAATTAAAGAGTTGA
TTTGTCAGTTTAAGTATTTGAGTGCATTTGAAAAAGATGTCATGTATTTAATGTGTGAACAATATAAGCCGAGAGAAATT
GCTCAATTGATGCATGTAAAAGAGAAAGTGATTTATAATGCCATACAACGATGTAAAAATAAAATAAAACGTTATTTCAA
AATGATTTGA

Domains

Predicted by InterproScan.

Sigma-70 region 2 (Sigma70_r2)

(26-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EXA1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sigH Staphylococcus aureus N315

100

100

1
  sigH Staphylococcus aureus MW2

97.884

100

0.979

Multiple sequence alignment