Detailed information NTG0970805

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: ACLII2_RS13910
• Genome accession: NZ_CP178213
• Coordinates: 2643632..2644657 (-)
• Length: 341 a.a.
• NCBI ID: WP_003245451.1
• Uniprot ID: O34470
• Organism: Bacillus subtilis subsp. subtilis strain BM107
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 2638632..2649657

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLII2_RS13875	panEA	2639117..2640013 (-)	897	WP_003232206.1	2-dehydropantoate 2-reductase	-
ACLII2_RS13880	ylbP	2640173..2640655 (+)	483	WP_003244940.1	N-acetyltransferase	-
ACLII2_RS13885	gerR	2640712..2641293 (-)	582	WP_003232210.1	sporulation specific transcriptional regulator GerR	-
ACLII2_RS13890	rpmF	2641439..2641618 (-)	180	WP_003154457.1	50S ribosomal protein L32	-
ACLII2_RS13895	ylbN	2641640..2642158 (-)	519	WP_003232214.1	YceD family protein	-
ACLII2_RS13900	-	2642186..2642371 (+)	186	WP_003232215.1	hypothetical protein	-
ACLII2_RS13905	tmcAL	2642368..2643615 (+)	1248	WP_003244707.1	nucleotidyltransferase	-
ACLII2_RS13910	sepM	2643632..2644657 (-)	1026	WP_003245451.1	protease DdcP	Regulator
ACLII2_RS13915	ylbK	2644659..2645441 (-)	783	WP_003232221.1	patatin family protein	-
ACLII2_RS13920	spoVV	2645622..2646848 (+)	1227	WP_003245492.1	dipicolinic acid transporter SpoVV	-
ACLII2_RS13925	coaD	2646859..2647344 (-)	486	WP_003245283.1	pantetheine-phosphate adenylyltransferase	-
ACLII2_RS13930	rsmD	2647349..2647903 (-)	555	WP_003232227.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACLII2_RS13935	ylbG	2648226..2648498 (-)	273	WP_009967171.1	YlbG family protein	-
ACLII2_RS13940	ylbF	2648553..2649002 (-)	450	WP_003221370.1	regulatory iron-sulfur-containing complex subunit RicF	Regulator
ACLII2_RS13945	ylbE	2649118..2649357 (-)	240	WP_003232231.1	YlbE-like family protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37651.23 Da
• Isoelectric Point: 6.5347

>NTDB_id=970805 ACLII2_RS13910 WP_003245451.1 2643632..2644657(-) (sepM) [Bacillus subtilis subsp. subtilis strain BM107]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST

Nucleotide

• Length: 1026 bp

>NTDB_id=970805 ACLII2_RS13910 WP_003245451.1 2643632..2644657(-) (sepM) [Bacillus subtilis subsp. subtilis strain BM107]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-331)

• Peptidase family M50 (Peptidase_M50) (59-220)

• PDZ domain (PDZ_2) (128-195)

3D structure

• PDB: 2KJP

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	39.143	100	0.402