Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AACK08_RS05755 Genome accession   NZ_AP029004
Coordinates   1204455..1204898 (+) Length   147 a.a.
NCBI ID   WP_071615340.1    Uniprot ID   -
Organism   Ralstonia pseudosolanacearum strain MAFF 211519     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1199455..1209898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACK08_RS05730 (MAFF211519_11360) - 1199554..1200408 (-) 855 WP_071507573.1 YgcG family protein -
  AACK08_RS05735 (MAFF211519_11370) - 1200421..1201047 (-) 627 WP_016723449.1 LemA family protein -
  AACK08_RS05740 (MAFF211519_11380) dapA 1201428..1202342 (+) 915 WP_071507572.1 4-hydroxy-tetrahydrodipicolinate synthase -
  AACK08_RS05745 (MAFF211519_11390) hemL 1202445..1203746 (-) 1302 WP_011000623.1 glutamate-1-semialdehyde 2,1-aminomutase -
  AACK08_RS05750 (MAFF211519_11400) - 1203958..1204140 (+) 183 WP_003261842.1 rubredoxin -
  AACK08_RS05755 (MAFF211519_11410) pilG 1204455..1204898 (+) 444 WP_071615340.1 response regulator Regulator
  AACK08_RS05760 (MAFF211519_11420) pilH 1204930..1205298 (+) 369 WP_003269243.1 response regulator Machinery gene
  AACK08_RS05765 (MAFF211519_11430) - 1205357..1205902 (+) 546 WP_011000625.1 chemotaxis protein CheW -
  AACK08_RS05770 (MAFF211519_11440) - 1206148..1208379 (+) 2232 WP_011000626.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 15807.37 Da        Isoelectric Point: 8.2887

>NTDB_id=97073 AACK08_RS05755 WP_071615340.1 1204455..1204898(+) (pilG) [Ralstonia pseudosolanacearum strain MAFF 211519]
MQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCDILMPKLDG
YLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ

Nucleotide


Download         Length: 444 bp        

>NTDB_id=97073 AACK08_RS05755 WP_071615340.1 1204455..1204898(+) (pilG) [Ralstonia pseudosolanacearum strain MAFF 211519]
ATGCAATCCGCGCGGGTGGAACAACTGACCAATTCCCAACCGCTGGCGAGTTCGCTTGCCGGCCGTAAAGTGCTGGTGAT
CGACGATTCCAGTACCATCCGCCGTACCGCGCAGATTTTCCTGTCCAAGGTCGATTGCCAGGTCGTGCTGGCCGAAGACG
GGTTCGATGCGCTGGCCAAGCTGGGTGACTTCAAGCCGGACATCGTCTTTTGCGACATCCTGATGCCCAAGCTGGACGGT
TACCTGACCTGCTCACTGATCAAGAAAAGCCCGAAGTTTCATGCCACGCCCGTGGTCATGCTGTCGTCGCGCGACGGGGT
GTTCGACCGCGCGCGCGGCAAGCTGGTCGGGGCGGTGGACCACCTTGCCAAGCCTTTCTCGCGGGAAGCGCTGCTGGAGG
CGGTCCAGGCGCATCTGCCGGCAGCCGCTGGCGCCGCGCAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(24-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

54.622

80.952

0.442

Multiple sequence alignment