Detailed information
Bioinformatically predicted
Overview
| Name | coiA | Type | Machinery gene |
| Locus tag | WHC13_RS06380 | Genome accession | NZ_CP150487 |
| Coordinates | 1229485..1230636 (+) | Length | 383 a.a. |
| NCBI ID | WP_003245839.1 | Uniprot ID | A0AAE2VB70 |
| Organism | Bacillus subtilis strain JNF2 | ||
| Function | homologous recombination; DNA uptake (predicted from homology) Homologous recombination DNA binding and uptake |
||
Genomic Context
Location: 1224485..1235636
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHC13_RS06345 (WHC13_06345) | yjbB | 1225157..1226374 (+) | 1218 | WP_010886478.1 | MFS transporter | - |
| WHC13_RS06350 (WHC13_06350) | yjbC | 1226538..1227116 (+) | 579 | WP_003244921.1 | GNAT family N-acetyltransferase | - |
| WHC13_RS06355 (WHC13_06355) | spx | 1227297..1227692 (+) | 396 | WP_003245483.1 | transcriptional regulator Spx | - |
| WHC13_RS06360 (WHC13_06360) | yjbE | 1227735..1228391 (-) | 657 | WP_003232944.1 | TerC family protein | - |
| WHC13_RS06365 (WHC13_06365) | - | 1228561..1228701 (+) | 141 | WP_119122854.1 | hypothetical protein | - |
| WHC13_RS06370 (WHC13_06370) | mecA | 1228668..1229324 (+) | 657 | WP_003245194.1 | adaptor protein MecA | Regulator |
| WHC13_RS06375 (WHC13_06375) | - | 1229319..1229441 (-) | 123 | WP_003245684.1 | hypothetical protein | - |
| WHC13_RS06380 (WHC13_06380) | coiA | 1229485..1230636 (+) | 1152 | WP_003245839.1 | competence protein CoiA | Machinery gene |
| WHC13_RS06385 (WHC13_06385) | pepF | 1230866..1232695 (+) | 1830 | WP_003245178.1 | oligoendopeptidase F | - |
| WHC13_RS06390 (WHC13_06390) | - | 1232733..1232900 (-) | 168 | WP_003244944.1 | hypothetical protein | - |
| WHC13_RS06395 (WHC13_06395) | spxH | 1233214..1234113 (-) | 900 | WP_003245184.1 | protease adaptor protein SpxH | - |
| WHC13_RS06400 (WHC13_06400) | yjbI | 1234110..1234508 (-) | 399 | WP_003232928.1 | group 2 truncated hemoglobin YjbI | - |
| WHC13_RS06405 (WHC13_06405) | cwlQ | 1234763..1235497 (-) | 735 | WP_003245645.1 | bifunctional muramidase/murein lytic transglycosylase | - |
Sequence
Protein
Download Length: 383 a.a. Molecular weight: 44755.85 Da Isoelectric Point: 10.0034
>NTDB_id=970576 WHC13_RS06380 WP_003245839.1 1229485..1230636(+) (coiA) [Bacillus subtilis strain JNF2]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRSECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRSECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE
Nucleotide
Download Length: 1152 bp
>NTDB_id=970576 WHC13_RS06380 WP_003245839.1 1229485..1230636(+) (coiA) [Bacillus subtilis strain JNF2]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| coiA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
97.389 |
0.974 |