Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   WHC13_RS06370 Genome accession   NZ_CP150487
Coordinates   1228668..1229324 (+) Length   218 a.a.
NCBI ID   WP_003245194.1    Uniprot ID   A0AAE2VF25
Organism   Bacillus subtilis strain JNF2     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1223668..1234324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHC13_RS06340 (WHC13_06340) oppF 1224133..1225050 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  WHC13_RS06345 (WHC13_06345) yjbB 1225157..1226374 (+) 1218 WP_010886478.1 MFS transporter -
  WHC13_RS06350 (WHC13_06350) yjbC 1226538..1227116 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  WHC13_RS06355 (WHC13_06355) spx 1227297..1227692 (+) 396 WP_003245483.1 transcriptional regulator Spx -
  WHC13_RS06360 (WHC13_06360) yjbE 1227735..1228391 (-) 657 WP_003232944.1 TerC family protein -
  WHC13_RS06365 (WHC13_06365) - 1228561..1228701 (+) 141 WP_119122854.1 hypothetical protein -
  WHC13_RS06370 (WHC13_06370) mecA 1228668..1229324 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  WHC13_RS06375 (WHC13_06375) - 1229319..1229441 (-) 123 WP_003245684.1 hypothetical protein -
  WHC13_RS06380 (WHC13_06380) coiA 1229485..1230636 (+) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  WHC13_RS06385 (WHC13_06385) pepF 1230866..1232695 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  WHC13_RS06390 (WHC13_06390) - 1232733..1232900 (-) 168 WP_003244944.1 hypothetical protein -
  WHC13_RS06395 (WHC13_06395) spxH 1233214..1234113 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25763.69 Da        Isoelectric Point: 4.1174

>NTDB_id=970575 WHC13_RS06370 WP_003245194.1 1228668..1229324(+) (mecA) [Bacillus subtilis strain JNF2]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=970575 WHC13_RS06370 WP_003245194.1 1228668..1229324(+) (mecA) [Bacillus subtilis strain JNF2]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAAATTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment