Detailed information NTG0970496

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: SOZ35_RS13160
• Genome accession: NZ_CP150480
• Coordinates: 2652186..2654519 (-)
• Length: 777 a.a.
• NCBI ID: WP_340639534.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain TL401
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2647186..2659519

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOZ35_RS13125 (SOZ35_13125)	-	2647517..2647855 (-)	339	WP_004429433.1	YqxA family protein	-
SOZ35_RS13130 (SOZ35_13130)	spoIIP	2647874..2649082 (-)	1209	WP_010789251.1	stage II sporulation protein P	-
SOZ35_RS13135 (SOZ35_13135)	gpr	2649149..2650252 (-)	1104	WP_010789252.1	GPR endopeptidase	-
SOZ35_RS13140 (SOZ35_13140)	rpsT	2650457..2650723 (+)	267	WP_003325396.1	30S ribosomal protein S20	-
SOZ35_RS13145 (SOZ35_13145)	holA	2650738..2651781 (-)	1044	WP_010789253.1	DNA polymerase III subunit delta	-
SOZ35_RS13150 (SOZ35_13150)	-	2651821..2651970 (-)	150	WP_010789254.1	hypothetical protein	-
SOZ35_RS13155 (SOZ35_13155)	-	2652011..2652145 (+)	135	WP_003229983.1	YqzM family protein	-
SOZ35_RS13160 (SOZ35_13160)	comEC	2652186..2654519 (-)	2334	WP_340639534.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
SOZ35_RS13165 (SOZ35_13165)	-	2654526..2655095 (-)	570	WP_340639535.1	ComE operon protein 2	-
SOZ35_RS13170 (SOZ35_13170)	comEA	2655163..2655786 (-)	624	WP_010789256.1	helix-hairpin-helix domain-containing protein	Machinery gene
SOZ35_RS13175 (SOZ35_13175)	comER	2655870..2656691 (+)	822	WP_003325389.1	late competence protein ComER	-
SOZ35_RS13180 (SOZ35_13180)	-	2656761..2657501 (-)	741	WP_003325388.1	class I SAM-dependent methyltransferase	-
SOZ35_RS13185 (SOZ35_13185)	rsfS	2657498..2657854 (-)	357	WP_003325387.1	ribosome silencing factor	-
SOZ35_RS13190 (SOZ35_13190)	yqeK	2657871..2658431 (-)	561	WP_088117608.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
SOZ35_RS13195 (SOZ35_13195)	-	2658421..2658990 (-)	570	WP_003325385.1	nicotinate-nucleotide adenylyltransferase	-
SOZ35_RS13200 (SOZ35_13200)	yhbY	2659002..2659292 (-)	291	WP_003325384.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 777 a.a.
• Molecular weight: 87059.98 Da
• Isoelectric Point: 8.8813

>NTDB_id=970496 SOZ35_RS13160 WP_340639534.1 2652186..2654519(-) (comEC) [Bacillus atrophaeus strain TL401]
MKNTRLLLPLAAASATAGIAAASFFSALFIFVLSLCFVYIKTKQLSLVFVSLSAFTIYFFLTSVIDSHNVSSYDIGTYKL
RAVIQEIPKIDGDRMSMVVRTPDGEKWASSYKMESLAEKEKLSQIEPGTACTFTGSLEKPKNATVPGTFDYKQYLYSQHI
HWNYSITAIQSCSTADGIQYRLLSVRKSLISFMNDHVPESSAGIVQALILGDRFYLMDDVLEAYQKLGVVHLLAISGLHV
GIVTAGIFYVLIRIGITREKAAILLLLFLPVYTILTGAAPSVMRAALMSGLYFIGSLWGKRMNPSIVICLSYLILLLFNP
YHLFQIGFQLSFAVSFSLILSSSIFKKLQSGGLVQIAMVSLIAQLGSLPILIYYFQQFSLISIPMNIIMVPFYTMFVMPF
SMIGFLLLSLSEPVGEYLFYWFDYIMRWSDKLIKYAADIEQFTVIAARPNVLVLFGLIGSIVVLLTAMEKSALYQRLLSV
LLFIAMLFLVVIFPRLDPEGEVDMLDIGQGDSMFISAPYQRGHVMIDTGGILSYLTEPWREKRHPFSLSEKVLIPFLTAK
GIKQLDALILTHADQDHIGEAKVLIKRHKVKQLIVPKGFVSEPNDEKVLRTAQQEGIRITEVKRGDTFQIKDLQFRVLSP
ETPDLNSKNNSSLVLWMKTGHLSWVLTGDLEKEGEQEIMKAFPDLKADILKAGHHGSKGSTGEEFVRHLKPKAAIISAGE
NNRYHHPHQEVLDILKAHSVRIFRTDQSGTIQYRFKSGFGTFSVYPPYDTTGMTETN

Nucleotide

• Length: 2334 bp

>NTDB_id=970496 SOZ35_RS13160 WP_340639534.1 2652186..2654519(-) (comEC) [Bacillus atrophaeus strain TL401]
ATGAAGAATACACGCCTTCTTTTGCCTCTGGCGGCAGCATCAGCAACGGCTGGCATAGCTGCTGCCTCCTTTTTCTCCGC
ACTTTTCATATTCGTTTTATCACTCTGTTTTGTTTATATCAAAACAAAACAGCTCTCACTCGTTTTTGTTAGTTTATCGG
CTTTTACGATCTATTTTTTCTTAACCTCTGTTATCGATTCTCATAATGTATCGTCCTATGACATCGGCACCTATAAGCTT
CGGGCGGTGATTCAGGAAATTCCAAAGATTGACGGAGACCGTATGTCCATGGTAGTTCGAACGCCGGATGGGGAAAAGTG
GGCTTCATCATATAAAATGGAGTCGCTTGCTGAAAAGGAAAAACTTTCACAGATAGAGCCAGGGACGGCTTGTACGTTTA
CCGGTTCTTTAGAAAAGCCAAAAAACGCAACGGTTCCCGGCACTTTCGATTATAAACAGTATCTGTACAGCCAGCATATT
CACTGGAATTACTCGATAACAGCAATCCAAAGTTGCAGCACGGCAGATGGAATACAGTATCGGCTTTTAAGCGTGAGAAA
GTCTCTTATTTCATTTATGAATGACCATGTTCCGGAATCCTCAGCAGGCATCGTGCAGGCGCTCATCCTGGGTGACAGAT
TTTATCTTATGGACGATGTGCTGGAAGCGTATCAAAAGCTCGGAGTTGTCCATCTGCTTGCGATTTCAGGGCTTCATGTA
GGTATTGTGACAGCTGGTATATTCTATGTGCTCATTCGAATTGGGATAACGAGAGAGAAGGCTGCTATTCTGCTGCTGTT
GTTTTTGCCTGTTTATACGATTTTAACCGGAGCGGCTCCGTCTGTGATGCGCGCAGCTCTTATGTCAGGTCTTTATTTTA
TCGGCAGTTTGTGGGGAAAGCGTATGAACCCTTCAATAGTGATCTGTCTTTCTTATTTAATTCTCCTTTTGTTTAATCCG
TATCATCTTTTTCAAATAGGGTTTCAGCTCTCATTTGCCGTAAGTTTCTCTTTAATACTTTCTTCCTCTATTTTTAAGAA
ACTTCAAAGCGGGGGACTCGTGCAGATCGCCATGGTGTCACTCATCGCTCAGCTTGGATCGCTTCCCATCCTTATCTATT
ATTTTCAGCAGTTTTCTCTTATCAGTATACCGATGAATATCATTATGGTGCCTTTTTATACGATGTTTGTCATGCCGTTT
TCTATGATAGGTTTTCTTTTGTTAAGTTTGTCTGAGCCGGTTGGTGAGTACCTGTTTTATTGGTTTGATTACATCATGCG
TTGGAGTGACAAGCTGATAAAGTATGCTGCAGATATTGAGCAATTCACAGTGATTGCAGCCCGTCCAAATGTGCTTGTCT
TGTTTGGGCTGATTGGATCTATCGTTGTTTTGCTGACAGCCATGGAGAAATCCGCCCTTTACCAAAGACTTCTGTCTGTG
CTGCTCTTTATCGCAATGCTTTTTCTGGTGGTTATTTTTCCTCGCCTGGACCCCGAGGGAGAAGTGGATATGCTTGATAT
CGGTCAGGGAGACAGCATGTTTATCAGCGCTCCGTATCAGCGCGGCCATGTGATGATAGACACTGGAGGAATCCTTTCAT
ACTTAACAGAGCCATGGAGGGAAAAACGGCATCCTTTTTCGCTTAGCGAAAAGGTGCTCATTCCTTTCTTAACAGCAAAA
GGCATTAAACAGCTTGATGCCTTAATTTTGACTCATGCGGACCAAGACCATATAGGGGAAGCAAAGGTTCTGATCAAACG
GCATAAAGTCAAACAGCTCATTGTGCCGAAAGGATTTGTTTCTGAACCGAATGATGAAAAAGTGCTGCGGACCGCACAGC
AAGAGGGAATTCGCATTACAGAGGTTAAACGAGGCGACACCTTTCAGATAAAGGATTTACAGTTTCGCGTACTGTCGCCT
GAGACTCCCGACCTGAACAGCAAAAATAACTCTTCTCTCGTGCTATGGATGAAAACAGGTCATCTCAGCTGGGTGCTGAC
AGGCGATCTCGAAAAGGAAGGGGAACAGGAGATCATGAAAGCTTTTCCGGATCTAAAAGCGGATATTTTAAAGGCGGGGC
ATCATGGCAGTAAAGGATCTACCGGAGAAGAGTTTGTCCGCCACCTGAAACCAAAGGCGGCAATTATTTCTGCCGGTGAG
AATAATCGGTATCACCATCCCCATCAGGAAGTCCTTGATATATTGAAAGCTCATTCTGTCCGCATTTTCCGCACTGATCA
AAGCGGGACGATCCAATACAGATTTAAAAGCGGGTTTGGAACGTTTTCTGTCTATCCTCCATATGATACAACAGGTATGA
CGGAGACGAACTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (24-169)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Competence protein (Competence) (208-467)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	65.508	100	0.655