Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | ACLFAG_RS29500 | Genome accession | NZ_CP177247 |
| Coordinates | 6301007..6301603 (-) | Length | 198 a.a. |
| NCBI ID | WP_003095839.1 | Uniprot ID | G3XD30 |
| Organism | Pseudomonas aeruginosa strain WYT | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6296007..6306603
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLFAG_RS29480 (ACLFAG_29475) | aroK | 6297138..6297656 (-) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| ACLFAG_RS29485 (ACLFAG_29480) | pilQ | 6297668..6299812 (-) | 2145 | WP_019726987.1 | type 4a pilus secretin PilQ | Machinery gene |
| ACLFAG_RS29490 (ACLFAG_29485) | comL/pilP | 6299866..6300390 (-) | 525 | WP_003095836.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| ACLFAG_RS29495 (ACLFAG_29490) | pilO | 6300387..6301010 (-) | 624 | WP_003103268.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACLFAG_RS29500 (ACLFAG_29495) | pilN | 6301007..6301603 (-) | 597 | WP_003095839.1 | type 4a pilus biogenesis protein PilN | Machinery gene |
| ACLFAG_RS29505 (ACLFAG_29500) | pilM | 6301603..6302667 (-) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| ACLFAG_RS29510 (ACLFAG_29505) | - | 6302852..6305323 (+) | 2472 | WP_019726988.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 22213.55 Da Isoelectric Point: 10.0895
>NTDB_id=970182 ACLFAG_RS29500 WP_003095839.1 6301007..6301603(-) (pilN) [Pseudomonas aeruginosa strain WYT]
MARINLLPWREELREQRKQQFLVILGGVLVASAALVFLGDQYFTAAIENQNARNDFLRKEIVVLDARIKEISELKSRRQQ
LLERMKIIQDLQGNRPIIGRVFDQLVRTLPDGVYFTDLKMTGKNIAIAGAAESNNRVSNLMRNMDASEWLTAPTLNEVKA
VTQGAVDQANVFQLTVQQTQPGEEDAKAKHGVAQGAKK
MARINLLPWREELREQRKQQFLVILGGVLVASAALVFLGDQYFTAAIENQNARNDFLRKEIVVLDARIKEISELKSRRQQ
LLERMKIIQDLQGNRPIIGRVFDQLVRTLPDGVYFTDLKMTGKNIAIAGAAESNNRVSNLMRNMDASEWLTAPTLNEVKA
VTQGAVDQANVFQLTVQQTQPGEEDAKAKHGVAQGAKK
Nucleotide
Download Length: 597 bp
>NTDB_id=970182 ACLFAG_RS29500 WP_003095839.1 6301007..6301603(-) (pilN) [Pseudomonas aeruginosa strain WYT]
ATGGCACGGATCAACCTTCTACCCTGGCGCGAAGAGCTGCGCGAGCAGCGCAAGCAGCAGTTCCTGGTGATTCTTGGCGG
CGTCCTGGTGGCATCGGCTGCGCTGGTATTCCTTGGCGACCAGTACTTCACCGCGGCCATCGAGAACCAGAACGCCCGCA
ACGACTTCCTGCGCAAGGAAATCGTCGTACTCGACGCCCGGATCAAGGAAATCAGCGAACTGAAGTCGCGGCGCCAGCAA
TTGCTCGAGCGGATGAAGATCATCCAGGACCTGCAGGGCAACCGTCCCATCATCGGACGGGTGTTCGACCAGCTCGTGCG
GACCTTGCCCGACGGCGTGTATTTCACCGACCTGAAGATGACCGGCAAGAACATCGCCATCGCCGGCGCGGCCGAGTCCA
ACAACCGCGTTTCCAATCTCATGCGCAACATGGACGCGTCCGAGTGGCTGACCGCCCCGACCCTGAACGAGGTCAAGGCG
GTGACCCAGGGCGCGGTGGACCAGGCCAACGTGTTCCAACTGACCGTGCAGCAGACGCAGCCCGGCGAAGAAGACGCCAA
GGCGAAGCATGGGGTTGCGCAAGGAGCCAAGAAATGA
ATGGCACGGATCAACCTTCTACCCTGGCGCGAAGAGCTGCGCGAGCAGCGCAAGCAGCAGTTCCTGGTGATTCTTGGCGG
CGTCCTGGTGGCATCGGCTGCGCTGGTATTCCTTGGCGACCAGTACTTCACCGCGGCCATCGAGAACCAGAACGCCCGCA
ACGACTTCCTGCGCAAGGAAATCGTCGTACTCGACGCCCGGATCAAGGAAATCAGCGAACTGAAGTCGCGGCGCCAGCAA
TTGCTCGAGCGGATGAAGATCATCCAGGACCTGCAGGGCAACCGTCCCATCATCGGACGGGTGTTCGACCAGCTCGTGCG
GACCTTGCCCGACGGCGTGTATTTCACCGACCTGAAGATGACCGGCAAGAACATCGCCATCGCCGGCGCGGCCGAGTCCA
ACAACCGCGTTTCCAATCTCATGCGCAACATGGACGCGTCCGAGTGGCTGACCGCCCCGACCCTGAACGAGGTCAAGGCG
GTGACCCAGGGCGCGGTGGACCAGGCCAACGTGTTCCAACTGACCGTGCAGCAGACGCAGCCCGGCGAAGAAGACGCCAA
GGCGAAGCATGGGGTTGCGCAAGGAGCCAAGAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Legionella pneumophila strain ERS1305867 |
41.714 |
88.384 |
0.369 |