Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   MHI53_RS15595 Genome accession   NZ_CP150304
Coordinates   3247697..3249412 (-) Length   571 a.a.
NCBI ID   WP_340371697.1    Uniprot ID   -
Organism   Peribacillus sp. FSL E2-0218     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3242697..3254412
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI53_RS15580 (MHI53_15580) - 3243182..3244759 (-) 1578 WP_340371696.1 FapA family protein -
  MHI53_RS15585 (MHI53_15585) spo0A 3245102..3245893 (-) 792 WP_061144398.1 sporulation transcription factor Spo0A -
  MHI53_RS15590 (MHI53_15590) spoIVB 3246234..3247526 (-) 1293 WP_061144399.1 SpoIVB peptidase -
  MHI53_RS15595 (MHI53_15595) recN 3247697..3249412 (-) 1716 WP_340371697.1 DNA repair protein RecN Machinery gene
  MHI53_RS15600 (MHI53_15600) argR 3249434..3249883 (-) 450 WP_061144401.1 transcriptional regulator ArgR -
  MHI53_RS15605 (MHI53_15605) - 3250192..3251019 (-) 828 WP_340371698.1 TlyA family RNA methyltransferase -
  MHI53_RS15610 (MHI53_15610) dxs 3251024..3252916 (-) 1893 WP_061144442.1 1-deoxy-D-xylulose-5-phosphate synthase -
  MHI53_RS15615 (MHI53_15615) - 3253163..3254056 (-) 894 WP_340371699.1 polyprenyl synthetase family protein -
  MHI53_RS15620 (MHI53_15620) - 3254058..3254291 (-) 234 WP_061144404.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 571 a.a.        Molecular weight: 64321.18 Da        Isoelectric Point: 5.0352

>NTDB_id=970097 MHI53_RS15595 WP_340371697.1 3247697..3249412(-) (recN) [Peribacillus sp. FSL E2-0218]
MLTELSIRNFAIIDSLSVSFEKGLTVLTGETGAGKSIIIDAVHLLVGGRGSSEFIRHGESKAEIEGLFQIDDEKHPVFAK
AEEFGLDMHDGMAILRRDISLSGKSVCRVNGKLVTIAILREIGRTLIDIHGQHEHQELMDERLHLPLLDQFGGEKIASAL
TEYQKLYKQYESASKQLNDLSQNEQQMVHRLDLIQFQFDEIQKADLKLQEDEELMEERKKINNFEKIHEALQTSYNALNG
EQHAIDWLSVAMNNMEEAAGLDEGLQASSEIVSNSYFLLEEAVSNIRDQLDSLDYDTERVEFIEGRLNEINQLKRKYGRS
IEEILEYGAGIEEEVEKLLNRETHIAKLEKEMKSIKADLIVEAKNLSELRQGFAQQLTKKIHQELKDLYMEKTIFEPHFH
QTAYTFDELSDKGINQSGLDSMEFYISTNPGEPLKPLSKIASGGELSRIMLALKSIFSKHQGITSIIFDEVDTGVSGRVA
QSIAEKIYKVATGSQVLCISHLPQVAAMADTHLFIAKNVRAGRTNTSVKPLIETEKIKEIGRMISGVEITDLTKQHANEL
IQLAKRLKITS

Nucleotide


Download         Length: 1716 bp        

>NTDB_id=970097 MHI53_RS15595 WP_340371697.1 3247697..3249412(-) (recN) [Peribacillus sp. FSL E2-0218]
TTGTTAACAGAACTATCGATTAGGAATTTTGCGATCATAGACAGCCTGTCCGTTTCGTTCGAGAAAGGCTTGACTGTCTT
GACCGGTGAAACAGGGGCAGGTAAATCAATTATTATAGATGCCGTCCACCTTTTGGTTGGGGGGCGTGGTTCCTCCGAGT
TTATTCGTCATGGAGAGTCAAAGGCGGAAATAGAAGGGCTGTTTCAAATAGATGATGAAAAACATCCGGTCTTTGCCAAG
GCGGAAGAATTCGGCTTGGACATGCATGATGGGATGGCCATTCTTCGAAGAGACATCTCGCTTAGCGGAAAAAGCGTATG
CCGGGTAAATGGAAAACTGGTGACGATTGCCATTTTACGTGAGATAGGGCGAACTCTGATTGATATCCATGGCCAGCATG
AACATCAGGAATTAATGGATGAACGACTCCATTTGCCGTTGCTGGATCAATTTGGCGGTGAAAAAATCGCGTCTGCACTT
ACCGAATACCAAAAGCTATATAAACAATATGAATCCGCTTCGAAGCAATTGAATGATTTAAGTCAGAATGAGCAGCAAAT
GGTGCACCGTCTTGACTTGATCCAATTTCAATTCGATGAAATCCAAAAAGCCGACTTGAAACTTCAGGAAGATGAAGAAT
TGATGGAAGAGCGGAAAAAAATTAATAATTTCGAGAAAATCCATGAAGCGCTGCAAACGAGCTATAATGCATTAAACGGT
GAGCAGCATGCAATTGATTGGCTGTCGGTAGCCATGAATAACATGGAAGAGGCGGCAGGGCTGGATGAGGGGCTACAAGC
CAGCTCAGAAATCGTCTCCAATAGTTACTTCCTGCTCGAGGAAGCCGTATCGAATATCCGAGATCAATTGGATTCCTTGG
ATTATGATACGGAACGTGTTGAATTCATCGAGGGACGCCTAAATGAAATAAATCAATTGAAACGGAAATACGGACGGTCC
ATCGAGGAAATCCTCGAATATGGCGCAGGCATTGAAGAGGAAGTCGAAAAGCTGCTTAATAGGGAAACGCATATCGCTAA
GCTTGAAAAGGAAATGAAATCGATTAAGGCCGATTTAATTGTTGAAGCAAAGAACCTGTCTGAATTACGCCAGGGGTTCG
CTCAACAGCTTACAAAAAAAATTCATCAGGAATTAAAAGATTTATACATGGAAAAAACAATTTTCGAACCTCATTTCCAT
CAAACGGCTTATACGTTCGATGAGTTGTCAGATAAGGGAATCAATCAGTCCGGGCTGGACTCCATGGAATTTTATATTTC
CACGAATCCCGGCGAACCATTAAAACCCCTTTCCAAAATTGCCTCGGGGGGAGAGCTGTCGCGGATCATGCTCGCGCTGA
AAAGCATTTTTTCCAAGCATCAAGGCATTACTTCGATTATATTCGATGAAGTGGACACTGGTGTCAGCGGGCGGGTTGCA
CAATCCATTGCCGAGAAGATTTATAAAGTGGCCACGGGGTCTCAGGTTTTGTGCATATCTCATTTGCCACAGGTCGCAGC
CATGGCGGATACCCATTTATTCATTGCGAAAAATGTCAGGGCAGGACGGACGAATACCTCCGTGAAGCCTTTGATTGAAA
CGGAAAAAATAAAAGAAATCGGCAGGATGATTTCGGGGGTCGAGATTACCGACTTGACGAAGCAGCATGCCAATGAGTTA
ATACAGCTGGCCAAAAGGCTGAAGATCACTTCTTGA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-233)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

60.243

100

0.608

Multiple sequence alignment