Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   NSQ62_RS07575 Genome accession   NZ_CP150291
Coordinates   1572106..1573902 (+) Length   598 a.a.
NCBI ID   WP_341323322.1    Uniprot ID   -
Organism   Solibacillus sp. FSL H8-0523     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1567106..1578902
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ62_RS07560 (NSQ62_07560) - 1569222..1569674 (+) 453 WP_341323319.1 hypothetical protein -
  NSQ62_RS07565 (NSQ62_07565) - 1569791..1570135 (+) 345 WP_341323320.1 hypothetical protein -
  NSQ62_RS07570 (NSQ62_07570) rcrP 1570365..1572113 (+) 1749 WP_341323321.1 ABC transporter ATP-binding protein Regulator
  NSQ62_RS07575 (NSQ62_07575) rcrQ 1572106..1573902 (+) 1797 WP_341323322.1 ABC transporter ATP-binding protein Regulator
  NSQ62_RS07580 (NSQ62_07580) - 1574202..1574807 (+) 606 WP_341323323.1 hypothetical protein -
  NSQ62_RS07585 (NSQ62_07585) - 1574822..1575454 (+) 633 WP_341323324.1 hypothetical protein -
  NSQ62_RS07590 (NSQ62_07590) - 1575564..1575806 (+) 243 WP_341323325.1 hypothetical protein -
  NSQ62_RS07595 (NSQ62_07595) - 1575925..1576359 (+) 435 WP_341323326.1 diguanylate cyclase -
  NSQ62_RS07600 (NSQ62_07600) - 1576546..1576854 (+) 309 WP_341323327.1 PadR family transcriptional regulator -
  NSQ62_RS07605 (NSQ62_07605) - 1576854..1577393 (+) 540 WP_341323328.1 DUF2812 domain-containing protein -
  NSQ62_RS07610 (NSQ62_07610) - 1577406..1578308 (+) 903 WP_341323329.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 598 a.a.        Molecular weight: 66453.92 Da        Isoelectric Point: 6.4375

>NTDB_id=969694 NSQ62_RS07575 WP_341323322.1 1572106..1573902(+) (rcrQ) [Solibacillus sp. FSL H8-0523]
MNRKHPGPRPGVRGEKPNHFKKTMKKLIAYCRAYLSVIIFALVLAFISTAFTVYSPDLLREMTDEISKGLSGVMDLDVIQ
KIGFILVVLYGLSFVFSYVQGFTMATVTQRITKKMRGDLSTKINRLPLNYFDKNTVGDTLSRVTNDVDTIGQTLNNSLGQ
LVSAGATFVGVLIMMFYTNWIMAITAILSTFLGFGLMTFIMKYSQKYFDNQQAQLAEINGHIEEMYSGHQIVKVYNGEAR
AIETFHKTNDKLYDNAWRAQFMSGMMMPLMNFIGNFGYVAVCIVGAFLVINDAITIGVIVAFMVYIRLFTQPLAQIAQAA
TNLQSTAAAAERVFTFLAEPELQNEATKTRVLMNVKGDVSFEHVSFGYVENQEIIKDFTLDVKAGQKVAIVGPTGAGKTT
IVNLLMRFYEMNEGDIKIDGVSIKDVSREQVHEQFCMVLQDTWLFEGTIRDNIVYSTEHVTDEQVVAAAKAVGMHQTITA
LPDGYNTMLNDKVSLSIGQKQLLTIARAMIENAPLLILDEATSSVDTRTEVQIQAAMDQLSVGKTSFVIAHRLSTIRNAD
VIIVMKDGSIIETGNHEVLLQKGGFYADLYNSQFEGVS

Nucleotide


Download         Length: 1797 bp        

>NTDB_id=969694 NSQ62_RS07575 WP_341323322.1 1572106..1573902(+) (rcrQ) [Solibacillus sp. FSL H8-0523]
ATGAATAGAAAACATCCAGGTCCTCGTCCCGGTGTGCGCGGCGAGAAGCCGAACCACTTTAAAAAGACGATGAAAAAGCT
GATTGCCTACTGTCGTGCTTACTTGTCGGTCATTATTTTTGCGTTAGTGCTCGCATTTATAAGTACGGCATTTACAGTAT
ATAGCCCGGATTTACTGCGTGAAATGACCGATGAAATTAGTAAGGGCCTTAGCGGTGTGATGGATTTAGATGTCATTCAA
AAAATCGGCTTTATTTTAGTGGTGCTGTACGGCCTGAGCTTTGTATTTAGCTATGTGCAGGGCTTTACGATGGCAACCGT
GACGCAGCGGATTACGAAAAAAATGCGCGGTGATTTATCGACGAAAATTAATCGTCTGCCGCTGAATTACTTCGATAAAA
ACACGGTCGGCGATACGCTAAGCCGTGTGACAAACGATGTCGATACAATCGGGCAAACGTTAAACAACAGCTTAGGGCAG
CTTGTGTCAGCGGGTGCAACCTTTGTTGGCGTGTTAATCATGATGTTTTACACGAACTGGATCATGGCGATTACGGCGAT
TTTATCGACGTTTTTAGGCTTTGGCCTCATGACGTTCATTATGAAGTACTCGCAAAAGTATTTCGATAACCAGCAGGCAC
AGCTTGCAGAAATTAATGGGCATATCGAGGAAATGTATAGTGGGCATCAAATTGTGAAGGTATACAACGGCGAAGCGCGT
GCGATTGAAACGTTCCACAAAACGAACGATAAACTGTACGATAACGCATGGCGCGCGCAGTTTATGAGTGGAATGATGAT
GCCGTTGATGAACTTTATCGGCAACTTTGGTTATGTCGCGGTCTGTATCGTCGGCGCGTTTTTAGTCATTAATGACGCCA
TTACCATTGGAGTTATCGTGGCGTTTATGGTGTATATTCGCCTGTTCACACAGCCACTTGCGCAAATCGCTCAGGCTGCT
ACGAACCTACAATCTACCGCAGCTGCAGCCGAGCGAGTGTTTACGTTTTTAGCAGAGCCTGAATTACAAAATGAAGCCAC
GAAAACGCGCGTGCTTATGAATGTAAAAGGTGACGTGTCTTTCGAGCATGTGAGCTTCGGTTATGTGGAAAATCAGGAAA
TTATTAAAGACTTCACGCTCGATGTGAAAGCCGGACAAAAGGTCGCGATTGTCGGGCCAACAGGAGCTGGGAAAACGACG
ATTGTCAACTTACTCATGCGCTTTTATGAAATGAATGAGGGCGATATTAAAATCGACGGGGTGTCGATTAAGGATGTATC
GCGCGAGCAGGTACATGAGCAGTTTTGTATGGTGCTACAGGATACGTGGTTATTTGAAGGTACAATTCGCGATAATATCG
TGTATTCAACAGAACACGTGACCGACGAACAAGTCGTTGCGGCGGCAAAAGCAGTCGGTATGCATCAAACGATTACGGCA
TTACCAGACGGCTACAATACGATGCTCAACGATAAAGTCAGTCTTTCTATCGGGCAAAAGCAACTGTTAACCATTGCGCG
GGCGATGATTGAAAACGCGCCACTACTTATTTTAGATGAGGCGACGAGCTCTGTAGATACGCGTACCGAGGTGCAAATTC
AAGCAGCGATGGACCAGCTGTCGGTTGGCAAAACATCATTTGTAATCGCACACCGTTTATCGACAATTCGTAATGCAGAT
GTGATCATTGTGATGAAGGATGGTTCGATTATCGAGACAGGGAATCATGAGGTGCTGCTTCAAAAAGGTGGCTTTTATGC
GGACCTTTATAATAGTCAATTTGAAGGGGTCTCTTAG

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(38-313)

ABC transporter (ABC_tran)

(376-523)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

56.153

96.488

0.542

Multiple sequence alignment