Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   NSQ62_RS07570 Genome accession   NZ_CP150291
Coordinates   1570365..1572113 (+) Length   582 a.a.
NCBI ID   WP_341323321.1    Uniprot ID   -
Organism   Solibacillus sp. FSL H8-0523     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1565365..1577113
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ62_RS07550 (NSQ62_07550) - 1565477..1566379 (+) 903 WP_341323317.1 stalk domain-containing protein -
  NSQ62_RS07555 (NSQ62_07555) - 1566613..1568496 (+) 1884 WP_341323318.1 N-acetylmuramoyl-L-alanine amidase -
  NSQ62_RS07560 (NSQ62_07560) - 1569222..1569674 (+) 453 WP_341323319.1 hypothetical protein -
  NSQ62_RS07565 (NSQ62_07565) - 1569791..1570135 (+) 345 WP_341323320.1 hypothetical protein -
  NSQ62_RS07570 (NSQ62_07570) rcrP 1570365..1572113 (+) 1749 WP_341323321.1 ABC transporter ATP-binding protein Regulator
  NSQ62_RS07575 (NSQ62_07575) rcrQ 1572106..1573902 (+) 1797 WP_341323322.1 ABC transporter ATP-binding protein Regulator
  NSQ62_RS07580 (NSQ62_07580) - 1574202..1574807 (+) 606 WP_341323323.1 hypothetical protein -
  NSQ62_RS07585 (NSQ62_07585) - 1574822..1575454 (+) 633 WP_341323324.1 hypothetical protein -
  NSQ62_RS07590 (NSQ62_07590) - 1575564..1575806 (+) 243 WP_341323325.1 hypothetical protein -
  NSQ62_RS07595 (NSQ62_07595) - 1575925..1576359 (+) 435 WP_341323326.1 diguanylate cyclase -
  NSQ62_RS07600 (NSQ62_07600) - 1576546..1576854 (+) 309 WP_341323327.1 PadR family transcriptional regulator -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64058.66 Da        Isoelectric Point: 6.7685

>NTDB_id=969693 NSQ62_RS07570 WP_341323321.1 1570365..1572113(+) (rcrP) [Solibacillus sp. FSL H8-0523]
MLKIFSYLQKKEWGLVAISIVFIVVQVWLDLKLPDYMAEITMLIQTEGTAVSDLIAPGSYMLLCAIGSMIAAIIVGYFAA
QVAAGLARRLRGQVFEKTLSFSMAEMNHFSTPSLITRSTNDITQVQMLIAMGLQVVIKAPILAIWAITKIANKNLEWTAA
TGVAVLVLILLITVVIIFAIPKFRIIQTLTDNLNRVTRENLTGIRVVRAYNAEGYQQGKFDDANKELMDTNLYAMRLMAL
IFPTMGLIMSGLSLSIYWIGAFLIHEANAMDRLPLFSNMVVFTSYAMQVVMAFMMVSMIFVMLPRAAVSAKRILEVLNMK
NTILDGRVKAGNGAGTVEFRNVGFKYPGAEEAVLDGVTFSAKKGETIAFIGSTGSGKTTILNLIPRLYDVSSGEVLLDGV
NVKDYKQAALREKIGYVSQSAVLFSGSVASNVSYSDETPVTERVKQAVAIAQGQEFVEKLDGSYEGAIAQGGKNVSGGQK
QRLSIARAIYHQPDIYLFDDSFSALDYKTDRELRHALKDETRDAITFIVAQRIGTIKEADQIVVLEHGRIVGKGTHEELM
KTCDTYQEIAYSQLSKEELGDE

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=969693 NSQ62_RS07570 WP_341323321.1 1570365..1572113(+) (rcrP) [Solibacillus sp. FSL H8-0523]
ATGCTAAAAATCTTTTCGTATTTACAGAAAAAAGAATGGGGATTAGTTGCAATTAGTATCGTATTCATCGTCGTGCAAGT
GTGGCTCGATTTAAAGCTACCGGACTATATGGCGGAAATTACGATGCTTATTCAAACGGAGGGTACGGCGGTGTCTGACC
TAATCGCACCGGGGAGCTATATGTTACTGTGTGCGATTGGTAGCATGATCGCGGCGATTATTGTCGGCTATTTTGCCGCA
CAGGTAGCAGCGGGCCTCGCACGAAGGTTGCGCGGGCAAGTATTTGAAAAAACGCTGTCATTTTCAATGGCGGAGATGAA
TCATTTTTCAACGCCGAGCTTAATTACGCGCTCGACAAATGATATTACACAGGTGCAAATGCTGATTGCGATGGGCTTAC
AGGTCGTGATTAAAGCACCGATTTTAGCGATTTGGGCGATTACGAAAATTGCCAATAAAAACTTAGAGTGGACGGCCGCA
ACAGGGGTAGCGGTATTGGTGCTCATTTTACTGATTACAGTTGTTATTATTTTTGCGATTCCGAAATTCCGTATTATTCA
AACGCTAACGGATAATTTAAACCGCGTGACGCGTGAAAACTTAACCGGGATTCGTGTGGTGCGTGCGTATAATGCAGAAG
GCTACCAGCAGGGGAAGTTTGACGATGCTAACAAAGAGTTAATGGATACAAACCTGTATGCGATGCGCTTAATGGCCCTC
ATTTTCCCGACAATGGGGCTCATTATGTCCGGTCTCTCTTTATCGATTTACTGGATTGGCGCGTTTTTAATTCATGAGGC
GAATGCGATGGATAGATTGCCATTGTTTTCAAACATGGTCGTATTTACGTCGTATGCGATGCAGGTTGTGATGGCGTTTA
TGATGGTTAGTATGATTTTTGTAATGCTGCCACGTGCGGCTGTTTCAGCAAAGCGTATTTTAGAAGTGCTGAACATGAAA
AATACGATTTTAGATGGCCGCGTAAAGGCGGGGAACGGTGCGGGGACGGTGGAATTCCGCAATGTTGGCTTTAAATACCC
AGGTGCGGAGGAAGCGGTTTTAGACGGAGTTACGTTTAGCGCGAAAAAGGGCGAGACGATTGCCTTTATCGGTTCGACGG
GTAGCGGGAAAACGACGATATTAAATTTAATTCCGCGCTTATATGATGTGTCGTCAGGTGAGGTGCTTTTAGACGGAGTG
AATGTCAAAGATTACAAGCAAGCAGCACTGCGTGAAAAAATCGGCTATGTGTCACAGTCTGCGGTGCTCTTTAGTGGTTC
GGTCGCGTCCAATGTGTCGTATAGCGACGAAACACCGGTAACAGAGCGCGTGAAACAGGCGGTTGCCATTGCACAAGGGC
AAGAGTTTGTGGAAAAGCTAGATGGAAGTTACGAAGGTGCAATTGCACAAGGCGGCAAAAACGTGTCAGGTGGACAAAAG
CAGCGGTTATCGATTGCTCGTGCGATTTATCATCAGCCAGACATTTATTTATTCGACGATTCGTTCTCGGCGCTTGATTA
TAAAACCGACCGCGAGTTACGCCATGCGTTAAAGGATGAAACGAGAGATGCGATTACGTTCATCGTCGCACAGCGCATCG
GCACGATTAAAGAAGCAGATCAAATCGTTGTACTTGAGCACGGGCGCATTGTCGGGAAGGGCACACATGAAGAACTGATG
AAGACATGTGACACATACCAAGAAATCGCGTATTCACAGCTTTCGAAGGAGGAATTAGGCGATGAATAG

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-293)

ABC transporter (ABC_tran)

(354-501)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.013

100

0.533

Multiple sequence alignment