Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHB78_RS09770 | Genome accession | NZ_CP150286 |
| Coordinates | 1812960..1813295 (-) | Length | 111 a.a. |
| NCBI ID | WP_096891855.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL K6-0138 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1807960..1818295
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHB78_RS09725 (MHB78_09725) | comGD | 1808204..1808647 (+) | 444 | WP_046129971.1 | competence type IV pilus minor pilin ComGD | - |
| MHB78_RS09730 (MHB78_09730) | comGE | 1808631..1808978 (+) | 348 | WP_046129970.1 | competence type IV pilus minor pilin ComGE | - |
| MHB78_RS09735 (MHB78_09735) | comGF | 1808893..1809378 (+) | 486 | WP_082094061.1 | competence type IV pilus minor pilin ComGF | - |
| MHB78_RS09740 (MHB78_09740) | comGG | 1809390..1809755 (+) | 366 | WP_046129969.1 | competence type IV pilus minor pilin ComGG | - |
| MHB78_RS09745 (MHB78_09745) | - | 1809837..1810019 (+) | 183 | WP_046129968.1 | YqzE family protein | - |
| MHB78_RS09750 (MHB78_09750) | - | 1810104..1810427 (-) | 324 | WP_046129967.1 | DUF3889 domain-containing protein | - |
| MHB78_RS09755 (MHB78_09755) | tapA | 1810690..1811415 (+) | 726 | WP_046129966.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHB78_RS09760 (MHB78_09760) | - | 1811412..1811993 (+) | 582 | WP_046129965.1 | signal peptidase I | - |
| MHB78_RS09765 (MHB78_09765) | - | 1812062..1812856 (+) | 795 | WP_046129964.1 | TasA family protein | - |
| MHB78_RS09770 (MHB78_09770) | sinR | 1812960..1813295 (-) | 336 | WP_096891855.1 | transcriptional regulator SinR | Regulator |
| MHB78_RS09775 (MHB78_09775) | sinI | 1813329..1813505 (-) | 177 | WP_046129962.1 | anti-repressor SinI family protein | Regulator |
| MHB78_RS09780 (MHB78_09780) | - | 1813691..1814485 (-) | 795 | WP_046129961.1 | YqhG family protein | - |
| MHB78_RS09785 (MHB78_09785) | - | 1814489..1816156 (-) | 1668 | WP_046129960.1 | SNF2-related protein | - |
| MHB78_RS09790 (MHB78_09790) | gcvT | 1816736..1817830 (+) | 1095 | WP_046129959.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12894.48 Da Isoelectric Point: 5.2973
>NTDB_id=969546 MHB78_RS09770 WP_096891855.1 1812960..1813295(-) (sinR) [Bacillus sp. FSL K6-0138]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKKSQEKE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKKSQEKE
Nucleotide
Download Length: 336 bp
>NTDB_id=969546 MHB78_RS09770 WP_096891855.1 1812960..1813295(-) (sinR) [Bacillus sp. FSL K6-0138]
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAATTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTTGATGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCGATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTACCAAAAATGGAAGAAGAG
TCAGGAAAAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAATTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTTGATGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCGATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTACCAAAAATGGAAGAAGAG
TCAGGAAAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |