Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | MHB50_RS07275 | Genome accession | NZ_CP150282 |
| Coordinates | 1545711..1546031 (+) | Length | 106 a.a. |
| NCBI ID | WP_340085076.1 | Uniprot ID | - |
| Organism | Siminovitchia sp. FSL H7-0308 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1540711..1551031
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHB50_RS07250 (MHB50_07250) | - | 1541840..1542007 (-) | 168 | WP_077111393.1 | DUF2759 domain-containing protein | - |
| MHB50_RS07255 (MHB50_07255) | - | 1542237..1542863 (+) | 627 | WP_077111391.1 | MBL fold metallo-hydrolase | - |
| MHB50_RS07260 (MHB50_07260) | - | 1542910..1543155 (-) | 246 | WP_077111389.1 | DUF2626 domain-containing protein | - |
| MHB50_RS07265 (MHB50_07265) | comGA | 1543613..1544725 (+) | 1113 | WP_077111387.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MHB50_RS07270 (MHB50_07270) | comGB | 1544625..1545695 (+) | 1071 | WP_139345616.1 | competence type IV pilus assembly protein ComGB | - |
| MHB50_RS07275 (MHB50_07275) | comGC | 1545711..1546031 (+) | 321 | WP_340085076.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MHB50_RS07280 (MHB50_07280) | comGD | 1546084..1546476 (+) | 393 | WP_236016962.1 | competence type IV pilus minor pilin ComGD | - |
| MHB50_RS07285 (MHB50_07285) | - | 1546463..1546771 (+) | 309 | WP_205178673.1 | type II secretion system GspH family protein | - |
| MHB50_RS07290 (MHB50_07290) | comGF | 1546740..1547195 (+) | 456 | WP_077111379.1 | competence type IV pilus minor pilin ComGF | - |
| MHB50_RS07295 (MHB50_07295) | - | 1547195..1547380 (+) | 186 | WP_340085077.1 | hypothetical protein | - |
| MHB50_RS07300 (MHB50_07300) | - | 1547551..1547736 (+) | 186 | WP_077111377.1 | YqzE family protein | - |
| MHB50_RS07305 (MHB50_07305) | - | 1547741..1548532 (-) | 792 | WP_205178669.1 | YqhG family protein | - |
| MHB50_RS07310 (MHB50_07310) | - | 1548501..1550201 (-) | 1701 | WP_340085078.1 | SNF2-related protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11945.92 Da Isoelectric Point: 9.6567
>NTDB_id=969398 MHB50_RS07275 WP_340085076.1 1545711..1546031(+) (comGC) [Siminovitchia sp. FSL H7-0308]
MLKFFRKNQKGFTLVEMMVVLLVITVLILVALPNVTKHSSNINNKGCDAIRHMVQGQVEAYRLTHQQIPSFTELQREGYV
KEKDNTCPNGKTLVIDSNGEVKVSSN
MLKFFRKNQKGFTLVEMMVVLLVITVLILVALPNVTKHSSNINNKGCDAIRHMVQGQVEAYRLTHQQIPSFTELQREGYV
KEKDNTCPNGKTLVIDSNGEVKVSSN
Nucleotide
Download Length: 321 bp
>NTDB_id=969398 MHB50_RS07275 WP_340085076.1 1545711..1546031(+) (comGC) [Siminovitchia sp. FSL H7-0308]
ATGTTGAAGTTTTTTCGGAAAAATCAGAAGGGATTTACATTGGTGGAAATGATGGTAGTTCTTTTGGTCATTACAGTGTT
GATTCTTGTCGCGCTTCCGAATGTGACAAAACACAGCTCAAACATTAATAACAAAGGATGCGATGCGATCAGACACATGG
TGCAGGGACAGGTTGAGGCCTATCGGTTGACACACCAACAAATTCCTTCTTTTACTGAGTTGCAAAGAGAAGGTTATGTA
AAGGAAAAAGACAACACTTGTCCAAACGGTAAAACTTTGGTGATTGATTCTAACGGGGAGGTCAAAGTATCGTCAAATTG
A
ATGTTGAAGTTTTTTCGGAAAAATCAGAAGGGATTTACATTGGTGGAAATGATGGTAGTTCTTTTGGTCATTACAGTGTT
GATTCTTGTCGCGCTTCCGAATGTGACAAAACACAGCTCAAACATTAATAACAAAGGATGCGATGCGATCAGACACATGG
TGCAGGGACAGGTTGAGGCCTATCGGTTGACACACCAACAAATTCCTTCTTTTACTGAGTTGCAAAGAGAAGGTTATGTA
AAGGAAAAAGACAACACTTGTCCAAACGGTAAAACTTTGGTGATTGATTCTAACGGGGAGGTCAAAGTATCGTCAAATTG
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
54.082 |
92.453 |
0.5 |
| comGC | Staphylococcus aureus MW2 |
45.098 |
96.226 |
0.434 |
| comGC | Staphylococcus aureus N315 |
45.098 |
96.226 |
0.434 |