Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   ACLIMA_RS17740 Genome accession   NZ_CP177039
Coordinates   3337923..3338792 (-) Length   289 a.a.
NCBI ID   WP_011198252.1    Uniprot ID   Q8VQ63
Organism   Bacillus licheniformis strain MPB04     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3332923..3343792
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLIMA_RS17705 (ACLIMA_17705) - 3333095..3333571 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  ACLIMA_RS17710 (ACLIMA_17710) - 3333571..3333855 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  ACLIMA_RS17715 (ACLIMA_17715) mnhG 3333839..3334213 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  ACLIMA_RS17720 (ACLIMA_17720) - 3334253..3334642 (-) 390 WP_003184847.1 hotdog fold thioesterase -
  ACLIMA_RS17725 (ACLIMA_17725) comA 3334659..3335297 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  ACLIMA_RS17730 (ACLIMA_17730) - 3335384..3337704 (-) 2321 Protein_3440 ATP-binding protein -
  ACLIMA_RS17735 (ACLIMA_17735) comX 3337744..3337908 (-) 165 WP_011198251.1 competence pheromone ComX -
  ACLIMA_RS17740 (ACLIMA_17740) comQ 3337923..3338792 (-) 870 WP_011198252.1 polyprenyl synthetase family protein Regulator
  ACLIMA_RS17745 (ACLIMA_17745) degQ 3338981..3339121 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  ACLIMA_RS17750 (ACLIMA_17750) - 3339607..3339954 (+) 348 WP_009329512.1 hypothetical protein -
  ACLIMA_RS17755 (ACLIMA_17755) - 3339997..3341217 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  ACLIMA_RS17760 (ACLIMA_17760) - 3341396..3342865 (-) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  ACLIMA_RS17765 (ACLIMA_17765) - 3342883..3343434 (-) 552 WP_003184868.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 289 a.a.        Molecular weight: 32743.41 Da        Isoelectric Point: 4.6799

>NTDB_id=969245 ACLIMA_RS17740 WP_011198252.1 3337923..3338792(-) (comQ) [Bacillus licheniformis strain MPB04]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINRSVAMNAATALYTISIKVIGSVSKEPVFFEKLMEYTLQSMQGQHDDLSNRPATEDECLDMIKRKSGALTALPCVLGA
MLATGKFDPTVEKYAYQLGIASQIENDYKALFYDSKSDIAKKKRTLAYLYLSRKFNQPSIDLLKTFETEDKIADKEIKCY
KEKLKAAGVTQYMYVMNQLAIQKFKKGIGELELGDMEKERLMSTLLNNN

Nucleotide


Download         Length: 870 bp        

>NTDB_id=969245 ACLIMA_RS17740 WP_011198252.1 3337923..3338792(-) (comQ) [Bacillus licheniformis strain MPB04]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACCGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
AGAACCGGTGTTTTTCGAAAAGCTAATGGAATATACACTTCAATCGATGCAGGGACAGCATGACGATCTCAGCAACCGCC
CTGCCACTGAAGATGAGTGCCTTGACATGATCAAGCGTAAATCCGGGGCGCTGACAGCCTTGCCATGCGTGCTGGGAGCT
ATGCTTGCTACGGGCAAATTTGACCCGACGGTTGAAAAGTACGCCTACCAGCTGGGCATTGCTTCACAAATTGAAAATGA
TTATAAAGCACTTTTTTATGATTCAAAAAGCGATATCGCCAAGAAAAAGCGGACGCTTGCGTATTTATATTTGTCAAGAA
AATTTAACCAGCCGTCGATTGATTTGTTAAAAACATTTGAAACTGAGGATAAAATTGCCGATAAAGAAATAAAATGCTAT
AAAGAGAAATTGAAGGCAGCAGGCGTCACTCAGTATATGTATGTTATGAATCAGCTCGCTATTCAGAAATTTAAGAAGGG
AATCGGGGAGCTTGAGTTGGGGGATATGGAGAAAGAACGTTTGATGTCTACCCTGCTGAATAACAATTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(41-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8VQ63

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.361

100

0.457