Detailed information NTG0969236

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACLIMA_RS15725
• Genome accession: NZ_CP177039
• Coordinates: 2963960..2965225 (-)
• Length: 421 a.a.
• NCBI ID: WP_003184083.1
• Uniprot ID: A0A6I7TM22
• Organism: Bacillus licheniformis strain MPB04
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2958960..2970225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLIMA_RS15710 (ACLIMA_15710)	yihA	2958995..2959582 (-)	588	WP_003184076.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
ACLIMA_RS15715 (ACLIMA_15715)	lon	2959579..2961903 (-)	2325	WP_016885551.1	endopeptidase La	-
ACLIMA_RS15720 (ACLIMA_15720)	lonB	2962122..2963777 (-)	1656	WP_003184080.1	ATP-dependent protease LonB	-
ACLIMA_RS15725 (ACLIMA_15725)	clpX	2963960..2965225 (-)	1266	WP_003184083.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
ACLIMA_RS15730 (ACLIMA_15730)	tig	2965494..2966768 (-)	1275	WP_003184085.1	trigger factor	-
ACLIMA_RS15735 (ACLIMA_15735)	ddcA	2966995..2968002 (-)	1008	WP_003184086.1	DNA damage checkpoint antagonist DdcA	-
ACLIMA_RS15740 (ACLIMA_15740)	leuD	2968132..2968731 (-)	600	WP_003184088.1	3-isopropylmalate dehydratase small subunit	-
ACLIMA_RS15745 (ACLIMA_15745)	leuC	2968744..2970162 (-)	1419	WP_003184089.1	3-isopropylmalate dehydratase large subunit	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46684.76 Da
• Isoelectric Point: 4.7004

>NTDB_id=969236 ACLIMA_RS15725 WP_003184083.1 2963960..2965225(-) (clpX) [Bacillus licheniformis strain MPB04]
MFKFNEEKGQLKCSFCGKTQDQVRKLVAGPGVYICDECIELCTEIVEEELGSEEEVEFKDVPKPKEIREILDEYVIGQDQ
AKKSLAVAVYNHYKRINSNSKVDDVELSKSNISMIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILL
KLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNI
LFICGGAFDGIEQIIKRRLGQKVIGFGSDNKHEDLEKEALLSKVLPEDLLRFGLIPEFIGRLPIIASLEPLDEKALVEIL
TKPKNALVKQYRKMLELDDVELVFEDEALTEIAKKAIERKTGARGLRSIIEGIMLDVMFDLPSREDIEKCVITGKTVTDG
EPPRLIMKDGTVVNKDKKTSA

Nucleotide

• Length: 1266 bp

>NTDB_id=969236 ACLIMA_RS15725 WP_003184083.1 2963960..2965225(-) (clpX) [Bacillus licheniformis strain MPB04]
ATGTTTAAATTCAACGAGGAAAAAGGACAATTGAAATGCTCGTTTTGCGGTAAAACACAAGATCAGGTACGCAAGCTTGT
CGCCGGACCAGGCGTATATATATGTGACGAGTGCATCGAACTTTGCACTGAAATTGTAGAAGAGGAACTCGGCTCTGAAG
AAGAAGTGGAGTTCAAAGATGTTCCGAAGCCAAAGGAAATCCGCGAGATTCTTGATGAATACGTCATCGGCCAGGACCAG
GCAAAAAAATCCCTTGCCGTGGCCGTCTACAATCATTACAAGCGGATCAATTCGAACAGCAAAGTCGACGACGTCGAGCT
GTCAAAAAGTAACATTTCCATGATCGGACCGACTGGAAGCGGAAAAACGCTTCTTGCTCAAACGCTTGCCCGCATCCTGA
ATGTGCCGTTCGCCATTGCGGATGCCACGTCGCTTACTGAAGCAGGCTATGTCGGTGAAGATGTGGAGAACATTTTGCTT
AAGCTGATCCAGGCAGCTGACTACGATGTTGAAAAAGCGGAAAAAGGCATTATCTACATCGATGAAATCGATAAAGTGGC
CAGAAAGTCCGAGAACCCTTCGATTACACGCGATGTATCAGGCGAAGGCGTTCAGCAGGCATTGCTTAAAATTCTTGAAG
GTACGGTTGCCAGCGTTCCTCCACAAGGCGGAAGAAAGCATCCTCATCAAGAGTTCATCCAAATTGACACAACCAACATC
CTGTTCATTTGCGGCGGAGCTTTTGACGGAATCGAGCAGATCATCAAGCGCCGTCTCGGCCAGAAGGTCATCGGCTTCGG
CTCTGACAACAAGCATGAAGACCTTGAAAAAGAAGCGCTTCTTTCCAAAGTGCTTCCGGAAGACTTGCTTCGCTTCGGGC
TGATCCCTGAATTCATCGGCCGTCTCCCGATCATCGCAAGCCTTGAGCCGCTGGATGAAAAAGCGCTGGTTGAAATTTTA
ACAAAACCGAAAAACGCGCTTGTTAAACAATATAGAAAAATGCTTGAATTGGATGATGTGGAGCTTGTGTTTGAAGACGA
AGCGCTCACAGAAATCGCTAAAAAAGCAATTGAACGTAAAACAGGAGCACGCGGACTTCGTTCCATTATCGAAGGAATCA
TGCTCGACGTGATGTTTGATCTGCCGTCTCGCGAGGATATTGAAAAATGCGTGATCACAGGCAAAACCGTCACTGACGGC
GAACCGCCGCGTCTCATTATGAAAGACGGCACGGTCGTCAATAAAGACAAAAAAACTTCAGCATAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (109-305)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (311-389)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A6I7TM22

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	68.766	94.299	0.648
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.413	97.15	0.577