Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   MHH79_RS19320 Genome accession   NZ_CP150275
Coordinates   3727175..3727294 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus sp. FSL K6-0993     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3722175..3732294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH79_RS19295 (MHH79_19295) albG 3722338..3723039 (+) 702 WP_100505938.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  MHH79_RS19300 (MHH79_19300) - 3723045..3724421 (-) 1377 WP_340034822.1 YncE family protein -
  MHH79_RS19305 (MHH79_19305) - 3724461..3725816 (-) 1356 WP_015384933.1 YncE family protein -
  MHH79_RS19310 (MHH79_19310) - 3725813..3726043 (-) 231 WP_015483838.1 hypothetical protein -
  MHH79_RS19315 (MHH79_19315) rapF 3726046..3727191 (+) 1146 WP_015384935.1 response regulator aspartate phosphatase RapF Regulator
  MHH79_RS19320 (MHH79_19320) phrF 3727175..3727294 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  MHH79_RS19325 (MHH79_19325) - 3727522..3727998 (+) 477 WP_015384936.1 hypothetical protein -
  MHH79_RS19330 (MHH79_19330) - 3728258..3728944 (+) 687 WP_340034825.1 hypothetical protein -
  MHH79_RS19335 (MHH79_19335) - 3730420..3731067 (+) 648 WP_015384940.1 ABC transporter ATP-binding protein -
  MHH79_RS19340 (MHH79_19340) - 3731060..3731623 (+) 564 WP_015483840.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=969146 MHH79_RS19320 WP_009968329.1 3727175..3727294(+) (phrF) [Bacillus sp. FSL K6-0993]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=969146 MHH79_RS19320 WP_009968329.1 3727175..3727294(+) (phrF) [Bacillus sp. FSL K6-0993]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment