Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MHH79_RS02165 Genome accession   NZ_CP150275
Coordinates   423102..424052 (+) Length   316 a.a.
NCBI ID   WP_015382768.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0993     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 418102..429052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH79_RS02140 (MHH79_02140) rapC 419560..420708 (+) 1149 WP_015252823.1 response regulator aspartate phosphatase RapC Regulator
  MHH79_RS02145 (MHH79_02145) phrC 420692..420814 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  MHH79_RS02150 (MHH79_02150) - 420914..421003 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  MHH79_RS02155 (MHH79_02155) - 421087..421200 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  MHH79_RS02160 (MHH79_02160) - 421353..422717 (-) 1365 WP_340034966.1 aspartate kinase -
  MHH79_RS02165 (MHH79_02165) ceuB 423102..424052 (+) 951 WP_015382768.1 petrobactin ABC transporter permease YclN Machinery gene
  MHH79_RS02170 (MHH79_02170) yclO 424045..424992 (+) 948 WP_123372797.1 petrobactin ABC transporter permease YclO -
  MHH79_RS02175 (MHH79_02175) yclP 424986..425744 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  MHH79_RS02180 (MHH79_02180) yclQ 425766..426719 (+) 954 WP_123372798.1 petrobactin ABC transporter substrate-binding protein YclQ -
  MHH79_RS02185 (MHH79_02185) - 426766..428184 (-) 1419 WP_123372799.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=969080 MHH79_RS02165 WP_015382768.1 423102..424052(+) (ceuB) [Bacillus sp. FSL K6-0993]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLIAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=969080 MHH79_RS02165 WP_015382768.1 423102..424052(+) (ceuB) [Bacillus sp. FSL K6-0993]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GATTGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACTATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGGGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment