Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   MHI44_RS13555 Genome accession   NZ_CP150268
Coordinates   2573355..2573753 (-) Length   132 a.a.
NCBI ID   WP_042977214.1    Uniprot ID   A0A165B0P6
Organism   Bacillus sp. FSL K6-1366     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2568355..2578753
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI44_RS13520 (MHI44_13520) - 2569218..2569414 (+) 197 Protein_2617 hypothetical protein -
  MHI44_RS13525 (MHI44_13525) - 2569456..2569770 (+) 315 Protein_2618 RDD family protein -
  MHI44_RS13530 (MHI44_13530) - 2569852..2570184 (+) 333 WP_256683196.1 YckD family protein -
  MHI44_RS13535 (MHI44_13535) - 2570312..2570734 (+) 423 WP_174616579.1 MarR family transcriptional regulator -
  MHI44_RS13540 (MHI44_13540) - 2570722..2571063 (+) 342 WP_032724911.1 DUF3147 family protein -
  MHI44_RS13545 (MHI44_13545) - 2571082..2571812 (+) 731 Protein_2622 AAA family ATPase -
  MHI44_RS13550 (MHI44_13550) bglC 2571885..2573318 (+) 1434 WP_097080589.1 6-phospho-beta-glucosidase -
  MHI44_RS13555 (MHI44_13555) nin/comJ 2573355..2573753 (-) 399 WP_042977214.1 DNA-entry nuclease inhibitor Regulator
  MHI44_RS13560 (MHI44_13560) nucA/comI 2573780..2574229 (-) 450 WP_003234608.1 DNA-entry nuclease Machinery gene
  MHI44_RS13565 (MHI44_13565) tlpC 2574397..2576118 (-) 1722 WP_339202139.1 methyl-accepting chemotaxis protein TlpC -
  MHI44_RS13570 (MHI44_13570) hxlB 2576229..2576786 (-) 558 WP_144483821.1 6-phospho-3-hexuloisomerase -
  MHI44_RS13575 (MHI44_13575) hxlA 2576792..2577424 (-) 633 WP_032724921.1 3-hexulose-6-phosphate synthase -
  MHI44_RS13580 (MHI44_13580) hxlR 2577656..2578018 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14908.88 Da        Isoelectric Point: 4.8991

>NTDB_id=968829 MHI44_RS13555 WP_042977214.1 2573355..2573753(-) (nin/comJ) [Bacillus sp. FSL K6-1366]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HVTESGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=968829 MHI44_RS13555 WP_042977214.1 2573355..2573753(-) (nin/comJ) [Bacillus sp. FSL K6-1366]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAGCGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A165B0P6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

97.727

100

0.977


Multiple sequence alignment