Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MHI44_RS06595 Genome accession   NZ_CP150268
Coordinates   1226277..1226921 (-) Length   214 a.a.
NCBI ID   WP_003220716.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1366     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1221277..1231921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI44_RS06560 (MHI44_06560) - 1222469..1222900 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  MHI44_RS06565 (MHI44_06565) - 1222900..1223241 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  MHI44_RS06570 (MHI44_06570) - 1223234..1224715 (+) 1482 WP_003228817.1 Na+/H+ antiporter subunit D -
  MHI44_RS06575 (MHI44_06575) - 1224721..1225197 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  MHI44_RS06580 (MHI44_06580) - 1225197..1225481 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  MHI44_RS06585 (MHI44_06585) mnhG 1225465..1225839 (+) 375 WP_003228812.1 monovalent cation/H(+) antiporter subunit G -
  MHI44_RS06590 (MHI44_06590) - 1225878..1226258 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  MHI44_RS06595 (MHI44_06595) comA 1226277..1226921 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  MHI44_RS06600 (MHI44_06600) comP 1227002..1229299 (-) 2298 WP_033884760.1 histidine kinase Regulator
  MHI44_RS06605 (MHI44_06605) comX 1229307..1229468 (-) 162 WP_003241045.1 competence pheromone ComX -
  MHI44_RS06610 (MHI44_06610) - 1229483..1230343 (-) 861 WP_192857944.1 polyprenyl synthetase family protein -
  MHI44_RS06615 (MHI44_06615) degQ 1230528..1230668 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  MHI44_RS06620 (MHI44_06620) - 1230890..1230952 (+) 63 Protein_1292 hypothetical protein -
  MHI44_RS06625 (MHI44_06625) - 1231131..1231499 (+) 369 WP_017695529.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24128.51 Da        Isoelectric Point: 4.6857

>NTDB_id=968808 MHI44_RS06595 WP_003220716.1 1226277..1226921(-) (comA) [Bacillus sp. FSL K6-1366]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=968808 MHI44_RS06595 WP_003220716.1 1226277..1226921(-) (comA) [Bacillus sp. FSL K6-1366]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTGCAAGAAGTTGAAAAAGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment