Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MHH68_RS14495 Genome accession   NZ_CP150266
Coordinates   2819459..2820100 (-) Length   213 a.a.
NCBI ID   WP_058013793.1    Uniprot ID   A0A2G8IV23
Organism   Bacillus sp. FSL K6-2841     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2814459..2825100
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH68_RS14460 (MHH68_14460) - 2815590..2816021 (+) 432 WP_034620105.1 Na(+)/H(+) antiporter subunit B -
  MHH68_RS14465 (MHH68_14465) - 2816021..2816362 (+) 342 WP_058013796.1 Na(+)/H(+) antiporter subunit C -
  MHH68_RS14470 (MHH68_14470) - 2816355..2817833 (+) 1479 WP_339163734.1 Na+/H+ antiporter subunit D -
  MHH68_RS14475 (MHH68_14475) - 2817840..2818319 (+) 480 WP_058013794.1 Na+/H+ antiporter subunit E -
  MHH68_RS14480 (MHH68_14480) - 2818319..2818600 (+) 282 WP_012011105.1 Na(+)/H(+) antiporter subunit F1 -
  MHH68_RS14485 (MHH68_14485) mnhG 2818584..2818958 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  MHH68_RS14490 (MHH68_14490) - 2819046..2819435 (-) 390 WP_003213775.1 hotdog fold thioesterase -
  MHH68_RS14495 (MHH68_14495) comA 2819459..2820100 (-) 642 WP_058013793.1 response regulator transcription factor Regulator
  MHH68_RS14500 (MHH68_14500) comP 2820181..2822493 (-) 2313 WP_339163736.1 ATP-binding protein Regulator
  MHH68_RS14505 (MHH68_14505) comX 2822547..2822717 (-) 171 WP_098677614.1 competence pheromone ComX -
  MHH68_RS14510 (MHH68_14510) - 2822714..2823628 (-) 915 WP_339163738.1 polyprenyl synthetase family protein -
  MHH68_RS14515 (MHH68_14515) degQ 2823780..2823920 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  MHH68_RS14520 (MHH68_14520) - 2824426..2824779 (+) 354 WP_034620108.1 hypothetical protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24154.55 Da        Isoelectric Point: 4.5688

>NTDB_id=968744 MHH68_RS14495 WP_058013793.1 2819459..2820100(-) (comA) [Bacillus sp. FSL K6-2841]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNQQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHELLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=968744 MHH68_RS14495 WP_058013793.1 2819459..2820100(-) (comA) [Bacillus sp. FSL K6-2841]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGATCAACAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATTTTGA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCGAAACAAATTCTAGAAACCAACCAACAAGTGAAAATCATC
ATTTATACAGGGTATGAAGTAGATGATTATTTTGAAGAGGCCATTCGGGCTGGATTGCACGGTGCAATTAGTAAAACAGA
GACAAAAGACAAAATTATTGAATACATACACCGCACATTGCAAGGAGAAGTTGTCATTCAGCTATCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAAAAGCCAGAACAGGCGCAGCAGACTGATCACGAGCTGTTAACAGAGCGAGAGTGTTTGATC
CTGAGAGAAGTGGAAAAAGGATACACGAACCAAGAGATTGCCGATGTGCTGCATTTGAGCAAACGCTCAATTGAATACAG
CTTGACATCCATCTTTAATAAGCTGAATGTTGGCTCTCGAACCGAAGCGGTGTTAATTGCAAAATCTGAAAGTGTGTTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2G8IV23

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.495

100

0.718

Multiple sequence alignment