Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   MHH51_RS15780 Genome accession   NZ_CP150263
Coordinates   3160138..3161949 (-) Length   603 a.a.
NCBI ID   WP_147210983.1    Uniprot ID   -
Organism   Oceanobacillus sp. FSL K6-3682     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 3155138..3166949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH51_RS15750 (MHH51_15750) - 3155693..3156496 (-) 804 WP_147210988.1 NAD kinase -
  MHH51_RS15755 (MHH51_15755) - 3156517..3157125 (-) 609 WP_147210987.1 GTP pyrophosphokinase family protein -
  MHH51_RS15760 (MHH51_15760) - 3157444..3158025 (+) 582 WP_339282473.1 CYTH domain-containing protein -
  MHH51_RS15765 (MHH51_15765) - 3158183..3158572 (+) 390 WP_147210985.1 globin -
  MHH51_RS15770 (MHH51_15770) - 3158588..3159451 (+) 864 WP_339282474.1 ClpXP adapter SpxH family protein -
  MHH51_RS15775 (MHH51_15775) - 3159828..3160007 (+) 180 WP_077600936.1 hypothetical protein -
  MHH51_RS15780 (MHH51_15780) pepF 3160138..3161949 (-) 1812 WP_147210983.1 oligoendopeptidase F Regulator
  MHH51_RS15785 (MHH51_15785) - 3162046..3163245 (-) 1200 WP_339282475.1 competence protein CoiA family protein -
  MHH51_RS15790 (MHH51_15790) mecA 3163450..3164148 (-) 699 WP_147210981.1 adaptor protein MecA -
  MHH51_RS15795 (MHH51_15795) spxA 3164674..3165069 (-) 396 WP_077600932.1 transcriptional regulator SpxA -
  MHH51_RS15800 (MHH51_15800) - 3165495..3165836 (+) 342 WP_147210980.1 P-II family nitrogen regulator -

Sequence

Protein


Download         Length: 603 a.a.        Molecular weight: 69484.56 Da        Isoelectric Point: 4.5875

>NTDB_id=968612 MHH51_RS15780 WP_147210983.1 3160138..3161949(-) (pepF) [Oceanobacillus sp. FSL K6-3682]
MAKATKQLPKRDEIPEELTWRLEDIFETDEKWKEEFQSLKNDISKLAAYKGKLNTSSDTLLEAFKLQDELSERLGKLYVY
GHLRTDQDTTNSYYQGLNAQAENLLTAASSQFSFLVPEILEIPEEQLKQFIEENKELQNYKKVLDDINRSRPHVLSEKEE
VLLAEADEPIGAISQTFSMLNNADLTFPSITNEDGEEVELTHGRYSTFLESSDRNVREQAFNAMYDTYGSFKNTFASTLS
GEVKSHNFNAKVRNYESARQAALDNNHIPEEVYDNLIEAVHEKLPLLHRYTKLRKKILGVDELHMYDLYTPLVKDVKMPV
TYDEAKKYVQEGLKPLGEDYADILEEAFGKRWIDVEENKGKRSGAYSSGTYGTNPYILLNWQDDVNNTFTLAHELGHSVH
SYYSRKNQPFRYGNYSIFVAEVASTTNEALLNDYLLKHLDDEKEKLYILNHFLEGFRGTVFRQTMFAEFEHDIHVLAQNG
EALTADRLTEVYYDLNKKYYGEDVVSDEKIGLEWARIPHFYMNYYVYQYATGYSAATALSKQILDGEEGAVDRYLGFLKS
GSSEDPIDVLKKAGVDMTHKQAILDALDVFEEKLTEMEELLDK

Nucleotide


Download         Length: 1812 bp        

>NTDB_id=968612 MHH51_RS15780 WP_147210983.1 3160138..3161949(-) (pepF) [Oceanobacillus sp. FSL K6-3682]
ATGGCAAAAGCAACAAAGCAATTACCAAAGCGTGATGAAATACCTGAAGAATTAACCTGGCGTCTGGAGGATATTTTTGA
AACAGACGAAAAGTGGAAAGAAGAATTCCAAAGCTTGAAAAATGATATTTCAAAATTGGCAGCGTATAAAGGAAAATTAA
ACACCTCCTCGGATACGCTATTAGAAGCATTTAAGCTGCAGGATGAGTTATCAGAGCGTCTAGGTAAGCTGTATGTTTAT
GGACATTTGCGTACAGACCAGGATACAACAAATTCTTATTATCAGGGCTTAAATGCACAAGCAGAAAATCTGCTGACTGC
TGCATCCAGCCAATTTAGTTTTCTTGTACCAGAAATTCTGGAAATACCGGAAGAACAGCTCAAGCAGTTTATAGAAGAAA
ATAAAGAGCTCCAAAATTATAAAAAGGTATTGGATGATATTAACCGCAGCCGCCCGCATGTGTTGAGTGAGAAGGAAGAG
GTACTACTTGCAGAAGCGGACGAACCAATTGGAGCAATATCACAAACATTCAGTATGCTGAATAATGCAGATTTGACCTT
CCCGTCTATTACAAATGAAGATGGAGAAGAAGTAGAACTGACACATGGCAGATACTCTACCTTTTTAGAATCATCCGATC
GGAATGTGCGTGAGCAGGCCTTCAATGCAATGTATGACACGTACGGCTCATTTAAAAATACATTTGCTTCCACATTGAGT
GGAGAAGTAAAATCACATAATTTCAATGCGAAAGTTCGAAATTATGAAAGTGCACGTCAGGCAGCTTTAGATAATAATCA
TATTCCTGAAGAAGTGTATGATAATTTAATTGAAGCAGTTCATGAAAAATTACCTTTATTACACCGTTATACAAAATTAA
GAAAGAAAATTCTTGGTGTAGATGAGCTGCATATGTATGATTTATACACACCGTTGGTCAAAGATGTGAAAATGCCTGTT
ACTTATGATGAAGCTAAAAAATATGTGCAGGAAGGTCTCAAACCTTTGGGTGAGGACTATGCAGATATTTTAGAAGAAGC
TTTTGGTAAACGATGGATTGATGTCGAAGAAAATAAAGGGAAGCGCAGTGGTGCATATTCGTCCGGAACATATGGAACGA
ATCCATATATTCTTTTGAATTGGCAGGATGATGTGAACAATACATTTACGCTGGCTCATGAGCTTGGGCATTCCGTACAC
AGCTACTATTCCAGAAAGAATCAGCCGTTCCGCTATGGGAATTATTCTATCTTTGTGGCAGAGGTTGCTTCTACAACAAA
CGAAGCCTTATTAAACGATTATTTATTAAAGCATCTTGATGATGAAAAAGAAAAGCTGTATATTCTAAATCACTTTTTAG
AAGGCTTCCGTGGAACTGTATTTCGTCAGACCATGTTTGCTGAGTTTGAACATGATATTCATGTATTGGCTCAAAATGGT
GAAGCCTTAACTGCAGATAGGCTGACAGAAGTTTATTATGATTTAAACAAAAAGTATTATGGTGAAGATGTTGTAAGTGA
CGAGAAGATTGGCTTGGAATGGGCACGTATTCCGCATTTTTACATGAATTATTATGTATATCAATATGCAACAGGATATT
CTGCAGCCACTGCATTATCGAAACAGATCCTAGATGGTGAAGAAGGGGCTGTAGATCGTTATTTAGGTTTCTTGAAATCA
GGAAGCAGTGAAGACCCTATTGATGTATTGAAAAAAGCTGGTGTAGATATGACGCATAAACAAGCTATTTTAGATGCTCT
GGATGTCTTTGAAGAAAAGCTGACGGAAATGGAAGAACTGCTGGATAAGTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(208-587)

Oligopeptidase F (Peptidase_M3_N)

(118-187)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

49.747

98.342

0.489

Multiple sequence alignment