Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   MHH76_RS13065 Genome accession   NZ_CP150261
Coordinates   2636922..2638652 (-) Length   576 a.a.
NCBI ID   WP_020452128.1    Uniprot ID   A0AAW6KD18
Organism   Bacillus sp. FSL L8-0193     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2631922..2643652
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH76_RS13040 (MHH76_13040) - 2632225..2632530 (-) 306 WP_020452124.1 membrane lipoprotein lipid attachment site-containing protein -
  MHH76_RS13045 (MHH76_13045) - 2633030..2633599 (-) 570 WP_020452125.1 serine acetyltransferase -
  MHH76_RS13050 (MHH76_13050) - 2633729..2634025 (-) 297 WP_020452126.1 antimicrobial peptide LCI -
  MHH76_RS13055 (MHH76_13055) spo0A 2634367..2635167 (-) 801 WP_003183361.1 sporulation transcription factor Spo0A Regulator
  MHH76_RS13060 (MHH76_13060) spoIVB 2635457..2636707 (-) 1251 WP_031304732.1 SpoIVB peptidase -
  MHH76_RS13065 (MHH76_13065) recN 2636922..2638652 (-) 1731 WP_020452128.1 DNA repair protein RecN Machinery gene
  MHH76_RS13070 (MHH76_13070) argR 2638684..2639133 (-) 450 WP_020452129.1 transcriptional regulator ArgR -
  MHH76_RS13075 (MHH76_13075) - 2639297..2640142 (-) 846 WP_020452130.1 TlyA family RNA methyltransferase -
  MHH76_RS13080 (MHH76_13080) dxs 2640139..2642040 (-) 1902 WP_023855166.1 1-deoxy-D-xylulose-5-phosphate synthase -
  MHH76_RS13085 (MHH76_13085) - 2642273..2643163 (-) 891 WP_023855167.1 polyprenyl synthetase family protein -
  MHH76_RS13090 (MHH76_13090) - 2643153..2643413 (-) 261 WP_023855168.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 576 a.a.        Molecular weight: 64604.45 Da        Isoelectric Point: 4.8363

>NTDB_id=968532 MHH76_RS13065 WP_020452128.1 2636922..2638652(-) (recN) [Bacillus sp. FSL L8-0193]
MLAELSIKNFAIIEELTVSFEKGLTVLTGETGAGKSIIIDAVSLLVGGRGSSEYVRYGEKRAELEGLFLLDSGHPVFDLC
TELGIEASDDMIVMRRDINANGKSICRVNGKLVTIAALREVGRLLLDIHGQHDNQLLMEDEHHLQLLDRFAGEEIEHALK
AYQEVYSRYMDVMRKVKELSESEQEMAHRLDLIQFQLDEIESANLEPKEDELLQEERRQIANFEKIYEALQNAYNALRNE
QAGLDWVGMASSELENVSGINEGLNKVSESVANAYYILEDSTFQIRNMLDELEYDPERLDYIESRLNEIKQLKRKYGATV
EDIQAYSAKIEEEIDRIENRDSHLQALKSRLESIGKDVAIEAANVSEIRKKWAKKLAKQIQQELKDLYMEKSTFDTEFQV
KKAERDDDAPVVNGMPVQLTKHGIDTVHFLISTNTGEPLKSLSKVASGGELSRIMLAMKSIFSAQQDVTSIIFDEVDTGV
SGRVAQAIAEKIHRVSIGSQVLCITHLPQVAAMADTHLLITKQSKDGRTTTSVTPLTKQEKIAEIGRMIAGVEVTDLTKR
HAKELLNQAKLVKTTG

Nucleotide


Download         Length: 1731 bp        

>NTDB_id=968532 MHH76_RS13065 WP_020452128.1 2636922..2638652(-) (recN) [Bacillus sp. FSL L8-0193]
TTGTTAGCTGAATTATCGATCAAAAACTTTGCCATTATCGAAGAATTAACCGTTTCTTTTGAAAAAGGGCTGACGGTTCT
GACCGGTGAAACCGGGGCCGGAAAATCGATCATCATCGACGCCGTCTCTTTGCTTGTCGGAGGCCGCGGCTCGTCCGAAT
ATGTCAGGTATGGCGAAAAAAGAGCCGAATTGGAAGGGCTTTTCCTCCTTGACAGCGGCCATCCGGTTTTTGATTTGTGC
ACAGAACTCGGGATTGAAGCCTCGGATGACATGATCGTCATGAGGAGAGATATTAACGCAAACGGCAAGAGCATCTGCCG
CGTCAATGGAAAACTTGTCACCATTGCCGCTTTGCGGGAAGTCGGCAGACTGCTGCTTGACATACACGGGCAGCACGACA
ATCAGCTGCTGATGGAGGATGAGCACCATCTTCAGCTTCTGGACAGGTTTGCAGGAGAAGAAATCGAGCATGCTCTAAAA
GCGTATCAGGAAGTTTACAGCCGCTACATGGACGTCATGAGAAAGGTGAAAGAGCTTTCTGAAAGCGAACAGGAAATGGC
TCACAGACTCGATTTAATACAGTTTCAGCTTGATGAAATCGAATCTGCAAACCTTGAGCCGAAAGAGGACGAACTTCTTC
AGGAAGAGCGCCGTCAAATCGCTAATTTCGAAAAAATATACGAAGCTCTGCAAAATGCCTATAATGCGCTACGCAACGAG
CAGGCTGGGCTTGACTGGGTCGGCATGGCTTCAAGCGAGCTTGAAAACGTCTCAGGCATCAATGAAGGGCTCAATAAAGT
ATCTGAATCCGTAGCCAACGCATACTACATTCTCGAAGATTCAACTTTTCAGATCAGAAATATGCTGGATGAACTCGAAT
ACGACCCCGAGCGCCTCGATTATATCGAATCGCGATTAAACGAAATCAAACAGCTGAAACGCAAATACGGCGCTACTGTC
GAAGATATCCAAGCTTATTCGGCTAAGATAGAGGAAGAGATCGACCGGATCGAAAACCGGGACAGCCACTTGCAGGCATT
AAAATCCCGCCTCGAATCAATCGGCAAGGATGTGGCGATTGAAGCCGCCAATGTGTCCGAAATCAGAAAAAAATGGGCGA
AAAAACTGGCCAAACAGATTCAGCAGGAACTGAAAGATCTGTATATGGAAAAATCGACATTCGATACGGAATTCCAGGTG
AAAAAAGCGGAACGGGATGATGATGCACCCGTCGTCAACGGTATGCCGGTTCAGCTCACAAAGCACGGCATTGATACCGT
CCATTTCCTAATCTCAACAAACACGGGAGAACCGCTCAAATCTTTGTCAAAGGTTGCATCTGGAGGAGAGCTGTCAAGAA
TCATGCTGGCCATGAAAAGCATTTTCTCTGCTCAGCAGGATGTTACATCGATCATTTTCGATGAAGTGGATACGGGTGTA
AGCGGCAGAGTCGCGCAGGCGATCGCCGAAAAAATACACCGCGTCTCGATCGGCTCTCAAGTTTTATGCATTACCCACTT
GCCGCAGGTGGCCGCGATGGCTGACACCCATCTTTTGATTACGAAACAGTCGAAAGACGGGAGAACGACGACAAGCGTCA
CGCCGTTGACAAAACAGGAAAAAATAGCGGAAATCGGCCGGATGATCGCCGGAGTCGAAGTAACGGATCTGACGAAGCGC
CATGCGAAAGAACTTTTGAACCAAGCTAAGCTTGTTAAAACTACCGGATAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-525)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

81.424

100

0.814

Multiple sequence alignment