Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | OO778_RS03025 | Genome accession | NZ_AP026765 |
| Coordinates | 625343..625957 (-) | Length | 204 a.a. |
| NCBI ID | WP_031780576.1 | Uniprot ID | A0A0T7EDM0 |
| Organism | Vibrio sp. STUT-A16 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 620343..630957
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO778_RS03015 (VspSTUT16_05120) | aceF | 621610..623502 (+) | 1893 | WP_264910668.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| OO778_RS03020 (VspSTUT16_05130) | lpdA | 623770..625197 (+) | 1428 | WP_005379993.1 | dihydrolipoyl dehydrogenase | - |
| OO778_RS03025 (VspSTUT16_05140) | opaR | 625343..625957 (-) | 615 | WP_031780576.1 | transcriptional regulator OpaR | Regulator |
| OO778_RS03030 (VspSTUT16_05150) | hpt | 626276..626806 (+) | 531 | WP_264910669.1 | hypoxanthine phosphoribosyltransferase | - |
| OO778_RS03035 (VspSTUT16_05160) | can | 626884..627552 (-) | 669 | WP_005379996.1 | carbonate dehydratase | - |
| OO778_RS03040 (VspSTUT16_05170) | - | 627830..629500 (+) | 1671 | WP_258686233.1 | SulP family inorganic anion transporter | - |
| OO778_RS03045 (VspSTUT16_05180) | - | 629753..630670 (+) | 918 | WP_047008973.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23612.89 Da Isoelectric Point: 6.4042
>NTDB_id=96850 OO778_RS03025 WP_031780576.1 625343..625957(-) (opaR) [Vibrio sp. STUT-A16]
MDSIAKRPRTRLSPIKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSE
HLANLFHGICYSLFVQANRAKSEAELKHLVSSYLDMLCIYNREH
MDSIAKRPRTRLSPIKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSE
HLANLFHGICYSLFVQANRAKSEAELKHLVSSYLDMLCIYNREH
Nucleotide
Download Length: 615 bp
>NTDB_id=96850 OO778_RS03025 WP_031780576.1 625343..625957(-) (opaR) [Vibrio sp. STUT-A16]
ATGGACTCAATTGCAAAGAGACCTAGAACTAGGCTTTCCCCGATTAAGCGTAAGCAACAGTTAATGGAAATCGCATTGGA
AGTGTTTGCGCGCCGCGGCATCGGTCGTGGTGGTCATGCAGATATCGCAGAAATTGCTCAAGTTTCTGTGGCGACCGTTT
TTAACTACTTCCCGACTCGTGAAGACTTGGTGGATGAAGTACTCAACCACGTCGTACGTCAGTTCTCGAACTTCCTATCG
GATAACATTGACTTAGACTTACACGCGCGTGAAAACATCGCCAATATTACTAATGCGATGATCGAGCTTGTCAGCCAAGA
TTGTCACTGGCTAAAAGTTTGGTTCGAGTGGAGCGCTTCAACACGTGATGAAGTATGGCCATTGTTTGTTTCAACTAACC
GTACTAACCAGTTGCTGGTACAAAACATGTTCATTAAAGCAATTGAACGTGGCGAAGTATGTGACCAGCACGATTCAGAA
CACTTGGCAAACTTGTTCCACGGTATTTGTTACTCACTGTTTGTCCAAGCGAACCGTGCAAAAAGTGAAGCGGAACTTAA
GCACCTTGTTAGTTCATACTTAGACATGCTTTGCATTTACAACCGTGAACACTAA
ATGGACTCAATTGCAAAGAGACCTAGAACTAGGCTTTCCCCGATTAAGCGTAAGCAACAGTTAATGGAAATCGCATTGGA
AGTGTTTGCGCGCCGCGGCATCGGTCGTGGTGGTCATGCAGATATCGCAGAAATTGCTCAAGTTTCTGTGGCGACCGTTT
TTAACTACTTCCCGACTCGTGAAGACTTGGTGGATGAAGTACTCAACCACGTCGTACGTCAGTTCTCGAACTTCCTATCG
GATAACATTGACTTAGACTTACACGCGCGTGAAAACATCGCCAATATTACTAATGCGATGATCGAGCTTGTCAGCCAAGA
TTGTCACTGGCTAAAAGTTTGGTTCGAGTGGAGCGCTTCAACACGTGATGAAGTATGGCCATTGTTTGTTTCAACTAACC
GTACTAACCAGTTGCTGGTACAAAACATGTTCATTAAAGCAATTGAACGTGGCGAAGTATGTGACCAGCACGATTCAGAA
CACTTGGCAAACTTGTTCCACGGTATTTGTTACTCACTGTTTGTCCAAGCGAACCGTGCAAAAAGTGAAGCGGAACTTAA
GCACCTTGTTAGTTCATACTTAGACATGCTTTGCATTTACAACCGTGAACACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
97.059 |
100 |
0.971 |
| hapR | Vibrio cholerae C6706 |
73.232 |
97.059 |
0.711 |
| hapR | Vibrio cholerae strain A1552 |
73.232 |
97.059 |
0.711 |