Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MKX80_RS12955 Genome accession   NZ_CP150260
Coordinates   2604763..2605563 (-) Length   266 a.a.
NCBI ID   WP_154994145.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0972     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2599763..2610563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX80_RS12930 (MKX80_12930) - 2601030..2601284 (+) 255 WP_154994135.1 DUF2627 domain-containing protein -
  MKX80_RS12935 (MKX80_12935) - 2601543..2602268 (-) 726 WP_182070401.1 glycerophosphodiester phosphodiesterase -
  MKX80_RS12940 (MKX80_12940) - 2602402..2603010 (-) 609 WP_234113235.1 N-acetylmuramoyl-L-alanine amidase -
  MKX80_RS12945 (MKX80_12945) - 2603058..2603378 (-) 321 WP_154994143.1 membrane lipoprotein lipid attachment site-containing protein -
  MKX80_RS12950 (MKX80_12950) - 2603901..2604470 (-) 570 WP_182071007.1 serine acetyltransferase -
  MKX80_RS12955 (MKX80_12955) spo0A 2604763..2605563 (-) 801 WP_154994145.1 sporulation transcription factor Spo0A Regulator
  MKX80_RS12960 (MKX80_12960) spoIVB 2605853..2607169 (-) 1317 WP_154994153.1 SpoIVB peptidase -
  MKX80_RS12965 (MKX80_12965) recN 2607317..2609047 (-) 1731 WP_182070399.1 DNA repair protein RecN Machinery gene
  MKX80_RS12970 (MKX80_12970) argR 2609079..2609528 (-) 450 WP_003183369.1 transcriptional regulator ArgR -
  MKX80_RS12975 (MKX80_12975) - 2609693..2610538 (-) 846 WP_154994148.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29515.02 Da        Isoelectric Point: 6.6109

>NTDB_id=968458 MKX80_RS12955 WP_154994145.1 2604763..2605563(-) (spo0A) [Bacillus sp. FSL K6-0972]
MEKIKVCVADDNRELVGLLSEYIEGQSDMEVLGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQLTHRAPSSQSSVLRPQAESPKKNLDASITTII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=968458 MKX80_RS12955 WP_154994145.1 2604763..2605563(-) (spo0A) [Bacillus sp. FSL K6-0972]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTTGGCCTATTAAGCGAATATATCGAGGGACAAAG
CGACATGGAAGTGCTTGGTGTCGCATACAACGGACAGGAATGTCTTTCTTTGTTTAAAGACAAGGAGCCCGACGTGCTTG
TGCTTGATATTATCATGCCTCATCTCGACGGATTGGCCGTTCTTGAAAGGCTGAGGGAATCGCAGCTTAAAAAACAGCCG
AATGTCATCATGCTGACGGCGTTCGGCCAGGAAGACGTGACGAAAAAAGCTGTAGATTTGGGCGCGTCGTATTTTATTTT
GAAACCTTTTGACATGGAGAACTTAGTCGGTCATATCCGCCAGGTCAGCGGAAACGGATCTCAATTGACACACCGTGCCC
CGTCTTCTCAAAGCAGTGTGCTTCGGCCGCAGGCGGAATCGCCAAAGAAAAACCTGGACGCCAGCATCACGACCATCATC
CACGAAATCGGCGTACCCGCTCATATAAAAGGCTATTTATACTTGAGAGAAGCCATCTCCATGGTGTATAACGACATCGA
ACTGCTCGGGAGCATTACAAAAGTGCTTTATCCGGATATCGCCAAAAAATTCAACACGACTGCAAGCCGCGTCGAACGGG
CGATTCGCCACGCCATCGAAGTCGCATGGAGCAGAGGCAACATCGACTCGATTTCGTCACTTTTCGGCTACACAGTCAGC
ATGTCAAAAGCAAAGCCGACCAATTCAGAATTCATCGCGATGGTCGCAGACAAGCTGAGACTGGAGCATAAGGCTTCTTA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.884

100

0.932

Multiple sequence alignment